Pseudomonas sp. RIT412 RIT412_S3_48

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RIT412 RIT412_S3_48 is characterized by having a single replicon, indicating a streamlined genomic structure that could facilitate efficient replication and adaptation. This species is cataloged under the accession number QBJA00000000.2, which provides a reference point for researchers interested in its genetic makeup and potential applications. The Pseudomonas genus is known for its metabolic versatility and ability to thrive in diverse environments, often making it a subject of interest in bioremediation and biotechnology. While specific metabolic traits of RIT412 RIT412_S3_48 are not provided, related Pseudomonas species are recognized for their capacity to degrade various organic pollutants, suggesting potential ecological roles in environmental cleanup processes. The presence of a single replicon could imply certain evolutionary advantages, such as reduced genomic complexity and rapid response to environmental changes. This trait may enhance the organism's adaptability in fluctuating environments, positioning it as a potentially important player in microbial communities, where it could interact with other microorganisms and contribute to nutrient cycling. In summary, Pseudomonas sp. RIT412 RIT412_S3_48, with its single replicon and classification, aligns with the broader characteristics of the Pseudomonas genus, hinting at its ecological significance in diverse habitats and its potential utility in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RIT412
StrainRIT412_S3_48

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RIT412 RIT412_S3_48
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RIT412 RIT412_S3_48, whole genome shotgun

Gene Summary

Adenine Count

1172267 bp

Thymine Count

1190975 bp

Guanine Count

1803330 bp

Cytosine Count

1757576 bp

Genome Length

5924148 bp

Protein-coding Genes

5139 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipoprotein-releasing abc transporter atp-binding protein loldDBY65_024645Not AvailableNegative5450635 - 545133325273.6
lipoprotein-releasing abc transporter permease subunitDBY65_024650Not AvailableNegative5451326 - 545257645478.2
pilz domain-containing proteinDBY65_024655Not AvailablePositive5452702 - 545328922047.3
glycerophosphodiester phosphodiesteraseDBY65_024660Not AvailablePositive5453326 - 545404826780.1
si-specific nad(p)(+) transhydrogenaseDBY65_024665Not AvailableNegative5454091 - 545548551061.8
hypothetical proteinDBY65_024670Not AvailableNegative5455777 - 5459748147146.0
mfs transporterDBY65_024675Not AvailablePositive5460267 - 546155645850.7
lysr family transcriptional regulatorDBY65_024680Not AvailableNegative5461629 - 546254334124.0
alkanesulfonate monooxygenase, fmnh(2)-dependentDBY65_024685Not AvailablePositive5462746 - 546388241568.4
sigma-54-dependent fis family transcriptional regulatorDBY65_024690Not AvailablePositive5464041 - 546514440692.9

Displaying genes 4841 – 4850 of 5264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.