Pseudomonas sp. RIT412 RIT412_S3_48

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RIT412 RIT412_S3_48 is characterized by having a single replicon, indicating a streamlined genomic structure that could facilitate efficient replication and adaptation. This species is cataloged under the accession number QBJA00000000.2, which provides a reference point for researchers interested in its genetic makeup and potential applications. The Pseudomonas genus is known for its metabolic versatility and ability to thrive in diverse environments, often making it a subject of interest in bioremediation and biotechnology. While specific metabolic traits of RIT412 RIT412_S3_48 are not provided, related Pseudomonas species are recognized for their capacity to degrade various organic pollutants, suggesting potential ecological roles in environmental cleanup processes. The presence of a single replicon could imply certain evolutionary advantages, such as reduced genomic complexity and rapid response to environmental changes. This trait may enhance the organism's adaptability in fluctuating environments, positioning it as a potentially important player in microbial communities, where it could interact with other microorganisms and contribute to nutrient cycling. In summary, Pseudomonas sp. RIT412 RIT412_S3_48, with its single replicon and classification, aligns with the broader characteristics of the Pseudomonas genus, hinting at its ecological significance in diverse habitats and its potential utility in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RIT412
StrainRIT412_S3_48

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RIT412 RIT412_S3_48
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RIT412 RIT412_S3_48, whole genome shotgun

Gene Summary

Adenine Count

1172267 bp

Thymine Count

1190975 bp

Guanine Count

1803330 bp

Cytosine Count

1757576 bp

Genome Length

5924148 bp

Protein-coding Genes

5139 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorDBY65_007290Not AvailableNegative1638265 - 163916432763.4
alpha/beta hydrolaseDBY65_007295Not AvailablePositive1639312 - 164026835794.2
catalase/peroxidase hpiDBY65_007300Not AvailableNegative1640351 - 164261282357.3
hypothetical proteinDBY65_007315Not AvailableNegative1643902 - 164424913564.0
filamentous hemagglutinin n-terminal domain-containing proteinDBY65_007320Not AvailableNegative1644258 - 1657250440279.0
shlb/fhac/hecb family hemolysin secretion/activation proteinDBY65_007325Not AvailableNegative1657272 - 165897263039.7
gnat family n-acetyltransferaseDBY65_007330Not AvailablePositive1659134 - 165956816195.5
sdr family nad(p)-dependent oxidoreductaseDBY65_007335Not AvailableNegative1659627 - 166039127026.5
arac family transcriptional regulatorDBY65_007340Not AvailablePositive1660488 - 166139932888.9
sdr family nad(p)-dependent oxidoreductaseDBY65_007345Not AvailableNegative1661393 - 166212125982.3

Displaying genes 1511 – 1520 of 5264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.