Pseudomonas sp. RIT412 RIT412_S3_48

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RIT412 RIT412_S3_48 is characterized by having a single replicon, indicating a streamlined genomic structure that could facilitate efficient replication and adaptation. This species is cataloged under the accession number QBJA00000000.2, which provides a reference point for researchers interested in its genetic makeup and potential applications. The Pseudomonas genus is known for its metabolic versatility and ability to thrive in diverse environments, often making it a subject of interest in bioremediation and biotechnology. While specific metabolic traits of RIT412 RIT412_S3_48 are not provided, related Pseudomonas species are recognized for their capacity to degrade various organic pollutants, suggesting potential ecological roles in environmental cleanup processes. The presence of a single replicon could imply certain evolutionary advantages, such as reduced genomic complexity and rapid response to environmental changes. This trait may enhance the organism's adaptability in fluctuating environments, positioning it as a potentially important player in microbial communities, where it could interact with other microorganisms and contribute to nutrient cycling. In summary, Pseudomonas sp. RIT412 RIT412_S3_48, with its single replicon and classification, aligns with the broader characteristics of the Pseudomonas genus, hinting at its ecological significance in diverse habitats and its potential utility in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RIT412
StrainRIT412_S3_48

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RIT412 RIT412_S3_48
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RIT412 RIT412_S3_48, whole genome shotgun

Gene Summary

Adenine Count

1172267 bp

Thymine Count

1190975 bp

Guanine Count

1803330 bp

Cytosine Count

1757576 bp

Genome Length

5924148 bp

Protein-coding Genes

5139 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amidaseDBY65_005760Not AvailableNegative1303111 - 130433443062.3
amidohydrolase/deacetylase family metallohydrolaseDBY65_005770Not AvailableNegative1305928 - 130719344979.3
carbon monoxide dehydrogenaseDBY65_005775Not AvailableNegative1307622 - 130831424403.1
(2fe-2s)-binding proteinDBY65_005780Not AvailableNegative1308338 - 130881717314.0
carbon monoxide dehydrogenaseDBY65_005785Not AvailableNegative1308814 - 130964429553.6
xanthine dehydrogenase family protein molybdopterin-binding subunitDBY65_005790Not AvailableNegative1309641 - 131202585833.7
amino acid abc transporter atp-binding proteinDBY65_005795Not AvailableNegative1312090 - 131284227309.6
amino acid abc transporter permeaseDBY65_005800Not AvailableNegative1312899 - 131355824373.5
amino acid abc transporter permeaseDBY65_005805Not AvailableNegative1313555 - 131420223463.7
abc transporter substrate-binding proteinDBY65_005810Not AvailableNegative1314212 - 131506330936.4

Displaying genes 1211 – 1220 of 5264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.