Chromobacterium sp. Panama

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Chromobacteriaceae

Genus

Chromobacterium

Description

Chromobacterium sp. Panama is a bacterial species characterized by the presence of flagella, which are appendages that enable motility. This trait is significant as it suggests the ability of the organism to navigate its environment, which may be important for its survival and ecological interactions. The genome of Chromobacterium sp. Panama contains a single replicon, indicating that it possesses a single circular chromosome. This genomic structure is typical for many bacteria and may influence the organism's replication and genetic stability. The organism is documented with the accession number QARX00000000.1, which is a reference point for researchers seeking to access genetic and genomic information pertaining to Chromobacterium sp. Panama. In terms of ecological insight, the presence of flagella likely allows Chromobacterium sp. Panama to thrive in various environments, potentially aiding in its ability to colonize different ecological niches. This motility can play a crucial role in the organism's interactions within microbial communities, including nutrient acquisition and competition with other microorganisms. The adaptability suggested by these traits may allow Chromobacterium sp. Panama to occupy diverse habitats, contributing to the overall dynamics of its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyChromobacteriaceae
GenusChromobacterium
SpeciesChromobacterium sp. Panama
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chromobacterium sp. Panama Scaffold_17, whole genome shotgun

Gene Summary

Adenine Count

939702 bp

Thymine Count

936600 bp

Guanine Count

1658636 bp

Cytosine Count

1679703 bp

Genome Length

5218353 bp

Protein-coding Genes

4518 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plp-dependent aminotransferase family proteinDB032_08140Not AvailableNegative1807288 - 180879955633.5
cytochrome c oxidase accessory protein ccogDB032_08145Not AvailableNegative1808796 - 181015750467.4
hypothetical proteinDB032_08150Not AvailableNegative1810446 - 181107522086.1
succinyl-diaminopimelate desuccinylaseDB032_08155Not AvailableNegative1811219 - 181235240901.6
arsenate reductaseDB032_08160Not AvailableNegative1812349 - 181269912659.3
type iv pili twitching motility protein piltDB032_08165Not AvailableNegative1812708 - 181384141888.7
long-chain-fatty-acid--coa ligaseDB032_08170Not AvailableNegative1813967 - 181564961772.5
ribosome maturation factor rimpDB032_08175Not AvailablePositive1815963 - 181638815903.3
transcription termination/antitermination protein nusaDB032_08180Not AvailablePositive1816440 - 181791854792.6
translation initiation factor if-2DB032_08185Not AvailablePositive1817958 - 181875528862.9

Displaying genes 1661 – 1670 of 4644 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.