Trichococcus patagoniensis strain DSM 18806

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Carnobacteriaceae

Genus

Trichococcus

Description

Trichococcus patagoniensis strain DSM 18806 is characterized as a rod-shaped bacterium with a single replicon. This specific strain is cataloged under the accession number QAOM00000000.1, which allows for its identification and study in microbiological research. The rod shape is typical for many bacterial species, contributing to its ecological adaptability and potential functional roles in various environments. The presence of a single replicon suggests that this strain possesses a streamlined genetic architecture, which may influence its replication and evolutionary strategies. Understanding the characteristics of Trichococcus patagoniensis strain DSM 18806 can provide insights into its ecological role, particularly in its natural habitat, which is likely to involve interactions within microbial communities. The specific traits of shape and genetic structure may play significant roles in the strain's metabolic capabilities and its ability to thrive in various conditions. These factors can influence nutrient cycling and contribute to the overall dynamics of microbial ecosystems. Further research on this strain may reveal its potential applications in biotechnology or environmental microbiology, contingent upon its metabolic functions and ecological interactions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyCarnobacteriaceae
GenusTrichococcus
SpeciesTrichococcus patagoniensis
Strainstrain DSM 18806

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Trichococcus patagoniensis strain DSM 18806 Ga0192380_150, whole

Gene Summary

Adenine Count

822907 bp

Thymine Count

819824 bp

Guanine Count

732186 bp

Cytosine Count

727623 bp

Genome Length

3102817 bp

Protein-coding Genes

2767 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rpir family transcriptional regulatorC8U37_10115Not AvailableNegative2000 - 288433585.4
pts system beta-glucoside-specific iia component (glc family) /pts system beta-glucoside-specific iib component (glc family) /pts system beta-glucoside-specific iic component (glc family)C8U37_10116Not AvailablePositive3140 - 500866271.6
6-phospho-beta-glucosidaseC8U37_10117Not AvailablePositive5027 - 649656340.4
dna-binding transcriptional merr regulatorC8U37_10118Not AvailablePositive6649 - 702614418.3
nadp-dependent 3-hydroxy acid dehydrogenase ydfgC8U37_10119Not AvailablePositive7220 - 795726623.1
transketolase-like proteinC8U37_10120Not AvailableNegative8295 - 896324153.2
dna-binding transcriptional merr regulatorC8U37_10121Not AvailableNegative9147 - 950013521.2
6-phospho-beta-glucosidaseC8U37_10122Not AvailablePositive9677 - 1112254692.4
putative membrane proteinC8U37_10123Not AvailableNegative11403 - 1404291286.5
badm/rrf2 family transcriptional regulatorC8U37_10124Not AvailableNegative14062 - 1454117814.7

Displaying genes 71 – 80 of 2860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.