Trichococcus patagoniensis strain DSM 18806

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Carnobacteriaceae

Genus

Trichococcus

Description

Trichococcus patagoniensis strain DSM 18806 is characterized as a rod-shaped bacterium with a single replicon. This specific strain is cataloged under the accession number QAOM00000000.1, which allows for its identification and study in microbiological research. The rod shape is typical for many bacterial species, contributing to its ecological adaptability and potential functional roles in various environments. The presence of a single replicon suggests that this strain possesses a streamlined genetic architecture, which may influence its replication and evolutionary strategies. Understanding the characteristics of Trichococcus patagoniensis strain DSM 18806 can provide insights into its ecological role, particularly in its natural habitat, which is likely to involve interactions within microbial communities. The specific traits of shape and genetic structure may play significant roles in the strain's metabolic capabilities and its ability to thrive in various conditions. These factors can influence nutrient cycling and contribute to the overall dynamics of microbial ecosystems. Further research on this strain may reveal its potential applications in biotechnology or environmental microbiology, contingent upon its metabolic functions and ecological interactions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyCarnobacteriaceae
GenusTrichococcus
SpeciesTrichococcus patagoniensis
Strainstrain DSM 18806

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Trichococcus patagoniensis strain DSM 18806 Ga0192380_150, whole

Gene Summary

Adenine Count

822907 bp

Thymine Count

819824 bp

Guanine Count

732186 bp

Cytosine Count

727623 bp

Genome Length

3102817 bp

Protein-coding Genes

2767 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ssu ribosomal protein s3pC8U37_10321Not AvailableNegative486142 - 48679824347.5
lsu ribosomal protein l22pC8U37_10322Not AvailableNegative486802 - 48715812856.8
ssu ribosomal protein s19pC8U37_10323Not AvailableNegative487179 - 48746010609.9
lsu ribosomal protein l2pC8U37_10324Not AvailableNegative487514 - 48834429894.4
lsu ribosomal protein l23pC8U37_10325Not AvailableNegative488379 - 48866310858.4
lsu ribosomal protein l4pC8U37_10326Not AvailableNegative488663 - 48928622455.0
lsu ribosomal protein l3pC8U37_10327Not AvailableNegative489313 - 48995123059.2
ssu ribosomal protein s10pC8U37_10328Not AvailableNegative489990 - 49029811629.3
ammonium transporterC8U37_10329Not AvailablePositive491068 - 49286163877.4
translation elongation factor 1a (ef-1a/ef-tu)C8U37_10330Not AvailableNegative493500 - 49468743166.6

Displaying genes 521 – 530 of 2860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.