Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Trichococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Trichococcus |
| Species | Trichococcus patagoniensis |
| Strain | strain DSM 18806 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
822907 bp
Thymine Count
819824 bp
Guanine Count
732186 bp
Cytosine Count
727623 bp
Genome Length
3102817 bp
Protein-coding Genes
2767 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular exopolysaccharide synthesis family protein | C8U37_102132 | Not Available | Positive | 416630 - 417388 | 27623.2 |
| protein-tyrosine phosphatase | C8U37_102133 | Not Available | Positive | 417388 - 418176 | 29430.4 |
| hypothetical protein | C8U37_102134 | Not Available | Negative | 418128 - 418241 | 4491.51 |
| lytr family transcriptional attenuator | C8U37_102135 | Not Available | Positive | 418568 - 419788 | 46556.7 |
| hypothetical protein | C8U37_102136 | Not Available | Negative | 419639 - 419929 | 11039.0 |
| glycosyl transferase family 2 | C8U37_102137 | Not Available | Positive | 420107 - 421156 | 39258.8 |
| glycosyl transferase family 2 | C8U37_102138 | Not Available | Positive | 421191 - 422165 | 37024.4 |
| na+-driven multidrug efflux pump | C8U37_102139 | Not Available | Positive | 422173 - 423765 | 59191.9 |
| hypothetical protein | C8U37_102140 | Not Available | Positive | 423788 - 424582 | 30632.7 |
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | C8U37_102141 | Not Available | Negative | 424691 - 430903 | 222647.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
