Trichococcus patagoniensis strain DSM 18806

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Carnobacteriaceae

Genus

Trichococcus

Description

Trichococcus patagoniensis strain DSM 18806 is characterized as a rod-shaped bacterium with a single replicon. This specific strain is cataloged under the accession number QAOM00000000.1, which allows for its identification and study in microbiological research. The rod shape is typical for many bacterial species, contributing to its ecological adaptability and potential functional roles in various environments. The presence of a single replicon suggests that this strain possesses a streamlined genetic architecture, which may influence its replication and evolutionary strategies. Understanding the characteristics of Trichococcus patagoniensis strain DSM 18806 can provide insights into its ecological role, particularly in its natural habitat, which is likely to involve interactions within microbial communities. The specific traits of shape and genetic structure may play significant roles in the strain's metabolic capabilities and its ability to thrive in various conditions. These factors can influence nutrient cycling and contribute to the overall dynamics of microbial ecosystems. Further research on this strain may reveal its potential applications in biotechnology or environmental microbiology, contingent upon its metabolic functions and ecological interactions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyCarnobacteriaceae
GenusTrichococcus
SpeciesTrichococcus patagoniensis
Strainstrain DSM 18806

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Trichococcus patagoniensis strain DSM 18806 Ga0192380_150, whole

Gene Summary

Adenine Count

822907 bp

Thymine Count

819824 bp

Guanine Count

732186 bp

Cytosine Count

727623 bp

Genome Length

3102817 bp

Protein-coding Genes

2767 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
energy-coupling factor transport system atp-binding proteinC8U37_1284Not AvailableNegative2958976 - 295982731110.5
energy-coupling factor transport system permease proteinC8U37_1285Not AvailableNegative2959824 - 296059128563.1
energy-coupling factor transport system substrate-specific componentC8U37_1286Not AvailableNegative2960604 - 296121221372.6
uridine phosphorylaseC8U37_1287Not AvailableNegative2961214 - 296196926753.2
putative effector of murein hydrolaseC8U37_1288Not AvailableNegative2962179 - 296287724448.1
holin-like proteinC8U37_1289Not AvailableNegative2962867 - 296324113171.6
hypothetical proteinC8U37_12810Not AvailablePositive2963577 - 29638349601.24
putative mfs family arabinose efflux permeaseC8U37_12811Not AvailableNegative2963918 - 296528249526.3
uncharacterized protein ybciC8U37_12812Not AvailableNegative2965445 - 296580413293.3
carbon starvation protein cstaC8U37_12813Not AvailableNegative2966060 - 296756554576.1

Displaying genes 2721 – 2730 of 2860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.