Trichococcus patagoniensis strain DSM 18806

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Carnobacteriaceae

Genus

Trichococcus

Description

Trichococcus patagoniensis strain DSM 18806 is characterized as a rod-shaped bacterium with a single replicon. This specific strain is cataloged under the accession number QAOM00000000.1, which allows for its identification and study in microbiological research. The rod shape is typical for many bacterial species, contributing to its ecological adaptability and potential functional roles in various environments. The presence of a single replicon suggests that this strain possesses a streamlined genetic architecture, which may influence its replication and evolutionary strategies. Understanding the characteristics of Trichococcus patagoniensis strain DSM 18806 can provide insights into its ecological role, particularly in its natural habitat, which is likely to involve interactions within microbial communities. The specific traits of shape and genetic structure may play significant roles in the strain's metabolic capabilities and its ability to thrive in various conditions. These factors can influence nutrient cycling and contribute to the overall dynamics of microbial ecosystems. Further research on this strain may reveal its potential applications in biotechnology or environmental microbiology, contingent upon its metabolic functions and ecological interactions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyCarnobacteriaceae
GenusTrichococcus
SpeciesTrichococcus patagoniensis
Strainstrain DSM 18806

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Trichococcus patagoniensis strain DSM 18806 Ga0192380_150, whole

Gene Summary

Adenine Count

822907 bp

Thymine Count

819824 bp

Guanine Count

732186 bp

Cytosine Count

727623 bp

Genome Length

3102817 bp

Protein-coding Genes

2767 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxynorspermidine dehydrogenaseC8U37_12522Not AvailablePositive2880107 - 288131845470.9
carboxynorspermidine decarboxylaseC8U37_12523Not AvailablePositive2881328 - 288246742338.5
poly-gamma-glutamate synthesis protein (capsule biosynthesis protein)C8U37_12524Not AvailablePositive2882589 - 288389048615.3
lpxtg-motif cell wall-anchored proteinC8U37_12525Not AvailablePositive2884708 - 2888031116861.0
lpxtg-motif cell wall-anchored protein/fimbrial isopeptide formation d2 family proteinC8U37_12526Not AvailablePositive2888074 - 288974759618.6
sortase aC8U37_12527Not AvailablePositive2889912 - 289084734676.9
lpxtg-site transpeptidase (sortase) family proteinC8U37_12528Not AvailablePositive2890837 - 289193140024.6
hypothetical proteinC8U37_12529Not AvailablePositive2892256 - 289291225166.9
had superfamily hydrolase (tigr01549 family)C8U37_12530Not AvailableNegative2892999 - 289362222925.8
sugar/nucleoside kinase (ribokinase family)C8U37_12531Not AvailablePositive2893845 - 289497541950.8

Displaying genes 2651 – 2660 of 2860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.