Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Trichococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Trichococcus |
| Species | Trichococcus patagoniensis |
| Strain | strain DSM 18806 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
822907 bp
Thymine Count
819824 bp
Guanine Count
732186 bp
Cytosine Count
727623 bp
Genome Length
3102817 bp
Protein-coding Genes
2767 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxynorspermidine dehydrogenase | C8U37_12522 | Not Available | Positive | 2880107 - 2881318 | 45470.9 |
| carboxynorspermidine decarboxylase | C8U37_12523 | Not Available | Positive | 2881328 - 2882467 | 42338.5 |
| poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) | C8U37_12524 | Not Available | Positive | 2882589 - 2883890 | 48615.3 |
| lpxtg-motif cell wall-anchored protein | C8U37_12525 | Not Available | Positive | 2884708 - 2888031 | 116861.0 |
| lpxtg-motif cell wall-anchored protein/fimbrial isopeptide formation d2 family protein | C8U37_12526 | Not Available | Positive | 2888074 - 2889747 | 59618.6 |
| sortase a | C8U37_12527 | Not Available | Positive | 2889912 - 2890847 | 34676.9 |
| lpxtg-site transpeptidase (sortase) family protein | C8U37_12528 | Not Available | Positive | 2890837 - 2891931 | 40024.6 |
| hypothetical protein | C8U37_12529 | Not Available | Positive | 2892256 - 2892912 | 25166.9 |
| had superfamily hydrolase (tigr01549 family) | C8U37_12530 | Not Available | Negative | 2892999 - 2893622 | 22925.8 |
| sugar/nucleoside kinase (ribokinase family) | C8U37_12531 | Not Available | Positive | 2893845 - 2894975 | 41950.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
