Stenotrophomonas sp. HMWF003

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas sp. HMWF003 is a rod-shaped bacterium characterized by the presence of flagella, which suggests potential motility in its environment. This species has a single replicon, indicating a streamlined genomic organization that may be advantageous for its adaptability and survival. The accession number for Stenotrophomonas sp. HMWF003 is QAIW00000000.1, which provides a reference point for researchers seeking to explore its genetic makeup and related studies. The ecological role of Stenotrophomonas species typically includes involvement in various environmental processes, such as nutrient cycling and potential bioremediation. Given the characteristics of Stenotrophomonas sp. HMWF003, it may contribute to these functions, particularly in habitats where motility is beneficial for accessing nutrients or colonizing new niches. The presence of flagella allows for active movement, which may enhance its ability to interact with other microorganisms and the surrounding environment. In summary, Stenotrophomonas sp. HMWF003 is a motile, rod-shaped bacterium with a single replicon. Its traits suggest potential ecological roles in nutrient cycling and bioremediation, highlighting its importance within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas sp. HMWF003
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas sp. HMWF003 NODE_675_length_4678_cov_7.524156,

Gene Summary

Adenine Count

723003 bp

Thymine Count

720604 bp

Guanine Count

1503614 bp

Cytosine Count

1500613 bp

Genome Length

4460324 bp

Protein-coding Genes

3754 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate porinDBR34_14960Not AvailablePositive3124241 - 312553647003.0
type i 3-dehydroquinate dehydrataseDBR34_14965Not AvailablePositive3125572 - 312642329818.3
mfs transporterDBR34_14970Not AvailablePositive3126473 - 312779245730.6
3-oxoadipate coa-transferaseDBR34_14975Not AvailablePositive3127954 - 312861223005.6
3-oxoadipate coa-transferaseDBR34_14980Not AvailablePositive3128609 - 312925622726.5
protocatechuate 3,4-dioxygenase subunit betaDBR34_14990Not AvailablePositive3130284 - 313099426636.4
protocatechuate 3,4-dioxygenase subunit alphaDBR34_14995Not AvailablePositive3130999 - 313156220632.3
3-carboxy-cis,cis-muconate cycloisomeraseDBR34_15000Not AvailablePositive3131632 - 313297547148.0
3-oxoadipate enol-lactonaseDBR34_15005Not AvailablePositive3132995 - 313377127579.8
4-carboxymuconolactone decarboxylaseDBR34_15010Not AvailablePositive3133818 - 313421014701.5

Displaying genes 2761 – 2770 of 3831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.