Stenotrophomonas sp. HMWF003

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas sp. HMWF003 is a rod-shaped bacterium characterized by the presence of flagella, which suggests potential motility in its environment. This species has a single replicon, indicating a streamlined genomic organization that may be advantageous for its adaptability and survival. The accession number for Stenotrophomonas sp. HMWF003 is QAIW00000000.1, which provides a reference point for researchers seeking to explore its genetic makeup and related studies. The ecological role of Stenotrophomonas species typically includes involvement in various environmental processes, such as nutrient cycling and potential bioremediation. Given the characteristics of Stenotrophomonas sp. HMWF003, it may contribute to these functions, particularly in habitats where motility is beneficial for accessing nutrients or colonizing new niches. The presence of flagella allows for active movement, which may enhance its ability to interact with other microorganisms and the surrounding environment. In summary, Stenotrophomonas sp. HMWF003 is a motile, rod-shaped bacterium with a single replicon. Its traits suggest potential ecological roles in nutrient cycling and bioremediation, highlighting its importance within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas sp. HMWF003
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas sp. HMWF003 NODE_675_length_4678_cov_7.524156,

Gene Summary

Adenine Count

723003 bp

Thymine Count

720604 bp

Guanine Count

1503614 bp

Cytosine Count

1500613 bp

Genome Length

4460324 bp

Protein-coding Genes

3754 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-methylaconitate cis-trans isomerase prpfDBR34_12390Not AvailableNegative2598863 - 260005341165.3
type ii toxin-antitoxin system rele/pare family toxinDBR34_12395Not AvailableNegative2600127 - 260045312179.5
type ii toxin-antitoxin system pard family antitoxinDBR34_12400Not AvailableNegative2600450 - 26006989202.96
fe/s-dependent 2-methylisocitrate dehydratase acndDBR34_12405Not AvailableNegative2600776 - 260339194962.4
2-methylcitrate synthaseDBR34_12410Not AvailableNegative2603530 - 260469042442.6
methylisocitrate lyaseDBR34_12415Not AvailableNegative2604720 - 260561031577.7
propionate catabolism operon regulatory protein prprDBR34_12420Not AvailablePositive2605771 - 260739059081.1
ankyrin repeat domain-containing proteinDBR34_12425Not AvailableNegative2607400 - 260823628797.0
doxx family proteinDBR34_12430Not AvailableNegative2608313 - 260877416108.2
pyridoxamine 5'-phosphate oxidaseDBR34_12435Not AvailableNegative2608871 - 260947022702.6

Displaying genes 2311 – 2320 of 3831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.