Pseudomonas sp. HMWF005

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. HMWF005 is characterized by having a single replicon, indicating a streamlined genomic architecture. The organism is cataloged under the accession number QAIV00000000.1, which provides a reference for further genetic and functional studies. Pseudomonas species are known for their metabolic versatility and adaptability to various environments, which often includes their ability to thrive in soil, water, and as plant-associated microbes. This adaptability is a significant ecological trait that allows them to play roles in nutrient cycling and bioremediation. While specific phenotypic traits and ecological interactions of Pseudomonas sp. HMWF005 are not provided, the genus is generally associated with beneficial plant interactions and the potential to degrade various organic pollutants. This suggests that Pseudomonas sp. HMWF005 may also contribute to ecological processes such as promoting plant health and aiding in the breakdown of environmental contaminants, thereby supporting ecosystem resilience. The single replicon structure may also indicate a streamlined evolutionary path, which could enhance the organism's ability to adapt to specific ecological niches. Overall, Pseudomonas sp. HMWF005 exemplifies the ecological significance of Pseudomonas species in their environments, although further research would be necessary to clarify its specific roles and interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. HMWF005
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. HMWF005
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. HMWF005 NODE_3112_length_5519_cov_6.155100, whole

Gene Summary

Adenine Count

1179799 bp

Thymine Count

1181804 bp

Guanine Count

1757290 bp

Cytosine Count

1746685 bp

Genome Length

5872459 bp

Protein-coding Genes

5908 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mbl fold metallo-hydrolaseDBR29_29845Not AvailableNegative5389896 - 539062127014.8
sodium:solute symporterDBR29_29850Not AvailableNegative5390708 - 539109713351.8
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolaseDBR29_29855Not AvailableNegative5391098 - 539241947660.9
dna-binding transcriptional regulator fisDBR29_29860Not AvailableNegative5392502 - 539282211722.1
trna dihydrouridine synthase dusbDBR29_29865Not AvailableNegative5392819 - 539382936439.0
duf3426 domain-containing proteinDBR29_29870Not AvailableNegative5394015 - 539449717894.6
formate dehydrogenase subunit betaDBR29_29875Not AvailableNegative5394498 - 539506520578.5
allantoin permeaseDBR29_29885Not AvailablePositive5396535 - 539711120943.6
hypothetical proteinDBR29_29895Not AvailableNegative5398072 - 53983359381.23
hypothetical proteinDBR29_29900Not AvailableNegative5398380 - 539872410964.6

Displaying genes 5561 – 5570 of 6014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.