Pseudomonas sp. HMWF005

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. HMWF005 is characterized by having a single replicon, indicating a streamlined genomic architecture. The organism is cataloged under the accession number QAIV00000000.1, which provides a reference for further genetic and functional studies. Pseudomonas species are known for their metabolic versatility and adaptability to various environments, which often includes their ability to thrive in soil, water, and as plant-associated microbes. This adaptability is a significant ecological trait that allows them to play roles in nutrient cycling and bioremediation. While specific phenotypic traits and ecological interactions of Pseudomonas sp. HMWF005 are not provided, the genus is generally associated with beneficial plant interactions and the potential to degrade various organic pollutants. This suggests that Pseudomonas sp. HMWF005 may also contribute to ecological processes such as promoting plant health and aiding in the breakdown of environmental contaminants, thereby supporting ecosystem resilience. The single replicon structure may also indicate a streamlined evolutionary path, which could enhance the organism's ability to adapt to specific ecological niches. Overall, Pseudomonas sp. HMWF005 exemplifies the ecological significance of Pseudomonas species in their environments, although further research would be necessary to clarify its specific roles and interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. HMWF005
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. HMWF005
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. HMWF005 NODE_3112_length_5519_cov_6.155100, whole

Gene Summary

Adenine Count

1179799 bp

Thymine Count

1181804 bp

Guanine Count

1757290 bp

Cytosine Count

1746685 bp

Genome Length

5872459 bp

Protein-coding Genes

5908 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna replication/repair protein recfDBR29_07055Not AvailableNegative1287303 - 128840641561.9
chromosomal replication initiator protein dnaaDBR29_07065Not AvailableNegative1289561 - 129108456829.0
50s ribosomal protein l34DBR29_07070Not AvailablePositive1291651 - 12917855067.36
ribonuclease p protein componentDBR29_07075Not AvailablePositive1291733 - 129220317702.7
membrane protein insertion efficiency factor yiddDBR29_07080Not AvailablePositive1292196 - 12924419228.21
membrane protein insertase yidcDBR29_07085Not AvailablePositive1292444 - 129412661910.1
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeDBR29_07090Not AvailablePositive1294208 - 129557848935.2
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgDBR29_07100Not AvailablePositive1296132 - 129803069310.9
16s rrna (guanine(527)-n(7))-methyltransferase rsmgDBR29_07105Not AvailablePositive1298027 - 129837312674.2
l-serine ammonia-lyaseDBR29_07110Not AvailablePositive1298374 - 12985305593.67

Displaying genes 1391 – 1400 of 6014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.