Sphingomonas sp. HMWF008

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. HMWF008 is a rod-shaped bacterium characterized by the presence of flagella, which suggests it is motile. This motility may enhance its ability to navigate various environments, potentially aiding in nutrient acquisition and ecological interactions. The bacterium has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation. The genome of Sphingomonas sp. HMWF008 is cataloged under the accession number QAIS00000000.1, which allows for further analysis of its genetic and metabolic capabilities. While specific metabolic pathways and ecological roles are not provided, members of the Sphingomonas genus are known for their versatility in degrading complex organic compounds, including pollutants. This trait positions Sphingomonas sp. HMWF008 as a potential candidate for bioremediation applications. In summary, the rod shape and flagellated motility of Sphingomonas sp. HMWF008, combined with its genetic simplicity, suggest a bacterium well-adapted to various ecological niches. Its potential for degrading complex compounds may contribute to ecosystem health, particularly in environments impacted by anthropogenic activity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. HMWF008
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. HMWF008
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. HMWF008 NODE_1051_length_3664_cov_7.837336, whole

Gene Summary

Adenine Count

665507 bp

Thymine Count

668368 bp

Guanine Count

1228796 bp

Cytosine Count

1229680 bp

Genome Length

3802708 bp

Protein-coding Genes

3512 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter permeaseDBR17_19425Not AvailableNegative3673110 - 367389228321.5
multidrug abc transporter atp-binding proteinDBR17_19430Not AvailableNegative3673993 - 367491333666.1
disulfide bond formation protein dsbaDBR17_19435Not AvailableNegative3675011 - 367576026187.6
peptidase m48DBR17_19440Not AvailableNegative3675757 - 367710647839.8
n-acetylmuramoyl-l-alanine amidaseDBR17_19450Not AvailablePositive3680367 - 368164746163.2
penicillin-binding proteinDBR17_19455Not AvailablePositive3681718 - 368426192109.2
peptide chain release factor 2DBR17_19460Not AvailablePositive3684338 - 368546541591.4
sam-dependent methyltransferaseDBR17_19465Not AvailablePositive3685471 - 368625628324.2
dna repair proteinDBR17_19470Not AvailableNegative3686253 - 368657311743.1
thymidylate synthaseDBR17_19475Not AvailablePositive3686723 - 368800946999.2

Displaying genes 3481 – 3490 of 3592 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.