Sphingomonas sp. HMWF008

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. HMWF008 is a rod-shaped bacterium characterized by the presence of flagella, which suggests it is motile. This motility may enhance its ability to navigate various environments, potentially aiding in nutrient acquisition and ecological interactions. The bacterium has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation. The genome of Sphingomonas sp. HMWF008 is cataloged under the accession number QAIS00000000.1, which allows for further analysis of its genetic and metabolic capabilities. While specific metabolic pathways and ecological roles are not provided, members of the Sphingomonas genus are known for their versatility in degrading complex organic compounds, including pollutants. This trait positions Sphingomonas sp. HMWF008 as a potential candidate for bioremediation applications. In summary, the rod shape and flagellated motility of Sphingomonas sp. HMWF008, combined with its genetic simplicity, suggest a bacterium well-adapted to various ecological niches. Its potential for degrading complex compounds may contribute to ecosystem health, particularly in environments impacted by anthropogenic activity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. HMWF008
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. HMWF008
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. HMWF008 NODE_1051_length_3664_cov_7.837336, whole

Gene Summary

Adenine Count

665507 bp

Thymine Count

668368 bp

Guanine Count

1228796 bp

Cytosine Count

1229680 bp

Genome Length

3802708 bp

Protein-coding Genes

3512 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar hook-associated protein 3DBR17_16125Not AvailablePositive3071405 - 307231931062.1
l-histidine n(alpha)-methyltransferaseDBR17_16130Not AvailableNegative3072473 - 307345035227.2
ergothioneine biosynthesis protein egtbDBR17_16135Not AvailableNegative3073450 - 307470045851.7
cob(i)yrinic acid a,c-diamide adenosyltransferaseDBR17_16140Not AvailableNegative3074757 - 307534120479.5
twin transmembrane helix small proteinDBR17_16145Not AvailableNegative3075369 - 30756118573.04
hypothetical proteinDBR17_16155Not AvailableNegative3076119 - 30763909089.47
hypothetical proteinDBR17_16165Not AvailableNegative3077886 - 30781319319.13
flia/whig family rna polymerase sigma factorDBR17_16170Not AvailableNegative3078600 - 307934627380.8
flagellar biosynthesis protein flhaDBR17_16175Not AvailableNegative3079343 - 308139471982.9
flagellar biosynthesis protein flgjDBR17_16180Not AvailableNegative3081440 - 308231830355.8

Displaying genes 2971 – 2980 of 3592 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.