Pseudomonas sp. HMWF021

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. HMWF021 is characterized by having a single replicon, which is indicative of its genetic organization. Its genomic information is available under the accession number QAIK00000000.1. This specific trait of possessing a single replicon may suggest a streamlined genetic architecture that could contribute to its adaptability in various environments. The genus Pseudomonas is known for its metabolic diversity and ability to thrive in diverse ecological niches, including soil, water, and as plant pathogens. The genetic configuration of Pseudomonas sp. HMWF021, while not extensively detailed in the supplied information, implies potential capabilities for utilizing a range of organic compounds, which is a hallmark of the Pseudomonas genus. The presence of a single replicon may also impact its growth and replication dynamics, potentially affecting its ecological interactions and competitive abilities in microbial communities. The adaptability of Pseudomonas species is often linked to their role in bioremediation and nutrient cycling, underscoring their importance in ecological systems. In summary, Pseudomonas sp. HMWF021, with its single replicon structure, may demonstrate significant metabolic versatility, contributing to its ecological roles in various environments. Its genetic organization could influence its interactions within microbial communities, highlighting the importance of genomic traits in shaping ecological dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. HMWF021
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. HMWF021
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. HMWF021 NODE_1542_length_10718_cov_11.952976,

Gene Summary

Adenine Count

1181754 bp

Thymine Count

1181051 bp

Guanine Count

1790509 bp

Cytosine Count

1795784 bp

Genome Length

5954435 bp

Protein-coding Genes

5063 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit aDBR18_18790Not AvailablePositive3888263 - 388971451877.8
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatbDBR18_18795Not AvailablePositive3889861 - 389130652903.2
septal ring lytic transglycosylase rlpa family lipoproteinDBR18_18800Not AvailablePositive3891501 - 389187513451.1
conjugal transfer protein trarDBR18_18805Not AvailablePositive3891922 - 389298337555.6
4-carboxymuconolactone decarboxylaseDBR18_18810Not AvailablePositive3892980 - 389335713678.4
aec family transporterDBR18_18815Not AvailableNegative3893443 - 389438433360.6
galactarate dehydrataseDBR18_18820Not AvailableNegative3894539 - 389609256331.2
mfs transporterDBR18_18825Not AvailableNegative3896104 - 389746849128.6
aldehyde dehydrogenase family proteinDBR18_18830Not AvailableNegative3897661 - 389910651201.0
5-dehydro-4-deoxyglucarate dehydrataseDBR18_18835Not AvailableNegative3899165 - 390007632580.1

Displaying genes 3501 – 3510 of 5210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.