Pseudomonas sp. HMWF021

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. HMWF021 is characterized by having a single replicon, which is indicative of its genetic organization. Its genomic information is available under the accession number QAIK00000000.1. This specific trait of possessing a single replicon may suggest a streamlined genetic architecture that could contribute to its adaptability in various environments. The genus Pseudomonas is known for its metabolic diversity and ability to thrive in diverse ecological niches, including soil, water, and as plant pathogens. The genetic configuration of Pseudomonas sp. HMWF021, while not extensively detailed in the supplied information, implies potential capabilities for utilizing a range of organic compounds, which is a hallmark of the Pseudomonas genus. The presence of a single replicon may also impact its growth and replication dynamics, potentially affecting its ecological interactions and competitive abilities in microbial communities. The adaptability of Pseudomonas species is often linked to their role in bioremediation and nutrient cycling, underscoring their importance in ecological systems. In summary, Pseudomonas sp. HMWF021, with its single replicon structure, may demonstrate significant metabolic versatility, contributing to its ecological roles in various environments. Its genetic organization could influence its interactions within microbial communities, highlighting the importance of genomic traits in shaping ecological dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. HMWF021
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. HMWF021
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. HMWF021 NODE_1542_length_10718_cov_11.952976,

Gene Summary

Adenine Count

1181754 bp

Thymine Count

1181051 bp

Guanine Count

1790509 bp

Cytosine Count

1795784 bp

Genome Length

5954435 bp

Protein-coding Genes

5063 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding response regulatorDBR18_16925Not AvailablePositive3526940 - 352761425617.2
two-component sensor histidine kinaseDBR18_16930Not AvailablePositive3527611 - 352902651273.4
type ii toxin-antitoxin system prevent-host-death family antitoxinDBR18_16935Not AvailablePositive3529482 - 35297218339.25
pin domain nucleaseDBR18_16940Not AvailablePositive3529718 - 353009514010.1
hypothetical proteinDBR18_16960Not AvailableNegative3532547 - 353281910107.7
sugar abc transporter permeaseDBR18_16965Not AvailableNegative3532830 - 353363029902.2
sugar abc transporter permeaseDBR18_16970Not AvailableNegative3533640 - 353450632283.0
abc transporter atp-binding proteinDBR18_16975Not AvailableNegative3534503 - 353561241436.7
abc transporter atp-binding proteinDBR18_16980Not AvailableNegative3535612 - 353670640761.4
sigma-54-dependent fis family transcriptional regulatorDBR18_16990Not AvailablePositive3537047 - 353888568252.1

Displaying genes 3161 – 3170 of 5210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.