Nocardioides currus strain IB-3 Nocar-IB3_20

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides currus strain IB-3, also known by its accession number PYXZ00000000.1, is a unique strain of the genus Nocardioides. It is characterized by having a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and function within its ecological niche. Nocardioides species are known for their role in the decomposition of organic matter and the bioremediation of pollutants, suggesting that strain IB-3 may possess similar capabilities. The presence of a single replicon could allow for efficient gene regulation and expression, potentially enhancing its functional efficiency in various environments. Understanding the traits of Nocardioides currus strain IB-3 can provide insights into its ecological role, particularly in nutrient cycling and organic matter degradation. Its ability to thrive in specific habitats may be crucial for maintaining soil health and ecosystem stability. The study of such strains is essential for exploring their potential applications in biotechnology and environmental management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides currus
Strainstrain IB-3 Nocar-IB3_20

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides currus strain IB-3 Nocar-IB3_20, whole genome shotgun

Gene Summary

Adenine Count

645512 bp

Thymine Count

645220 bp

Guanine Count

1623180 bp

Cytosine Count

1619937 bp

Genome Length

4533856 bp

Protein-coding Genes

4242 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polyketide cyclaseC7S10_16475Not AvailableNegative3381828 - 338225915910.6
had family hydrolaseC7S10_16480Not AvailableNegative3382331 - 338298723507.6
llm class f420-dependent oxidoreductaseC7S10_16485Not AvailablePositive3383074 - 338405435533.8
n-acyl-d-glutamate deacylaseC7S10_16490Not AvailablePositive3384051 - 338526241635.6
hypothetical proteinC7S10_16495Not AvailablePositive3385343 - 338616727251.8
hyaluronate lyaseC7S10_16500Not AvailablePositive3386164 - 338736042326.6
type iii polyketide synthaseC7S10_16505Not AvailablePositive3387357 - 338841237021.3
hypothetical proteinC7S10_16510Not AvailablePositive3388409 - 338895419620.3
hypothetical proteinC7S10_16515Not AvailablePositive3388926 - 338998737189.7
isopentenyl-diphosphate delta-isomeraseC7S10_16520Not AvailablePositive3389984 - 339055920613.4

Displaying genes 3241 – 3250 of 4293 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.