Nocardioides currus strain IB-3 Nocar-IB3_20

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides currus strain IB-3, also known by its accession number PYXZ00000000.1, is a unique strain of the genus Nocardioides. It is characterized by having a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and function within its ecological niche. Nocardioides species are known for their role in the decomposition of organic matter and the bioremediation of pollutants, suggesting that strain IB-3 may possess similar capabilities. The presence of a single replicon could allow for efficient gene regulation and expression, potentially enhancing its functional efficiency in various environments. Understanding the traits of Nocardioides currus strain IB-3 can provide insights into its ecological role, particularly in nutrient cycling and organic matter degradation. Its ability to thrive in specific habitats may be crucial for maintaining soil health and ecosystem stability. The study of such strains is essential for exploring their potential applications in biotechnology and environmental management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides currus
Strainstrain IB-3 Nocar-IB3_20

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides currus strain IB-3 Nocar-IB3_20, whole genome shotgun

Gene Summary

Adenine Count

645512 bp

Thymine Count

645220 bp

Guanine Count

1623180 bp

Cytosine Count

1619937 bp

Genome Length

4533856 bp

Protein-coding Genes

4242 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction branch migration dna helicase ruvbC7S10_16270Not AvailableNegative3338759 - 333985639201.9
holliday junction branch migration protein ruvaC7S10_16275Not AvailableNegative3339861 - 334046020457.8
crossover junction endodeoxyribonuclease ruvcC7S10_16280Not AvailableNegative3340457 - 334103820134.4
yebc/pmpr family dna-binding transcriptional regulatorC7S10_16285Not AvailableNegative3341119 - 334189527642.4
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtC7S10_16290Not AvailableNegative3341895 - 334258424684.7
serine hydrolaseC7S10_16295Not AvailablePositive3342130 - 334369255156.1
pyridoxal 5'-phosphate synthase lyase subunit pdxsC7S10_16300Not AvailableNegative3343696 - 334460432060.5
cdp-alcohol phosphatidyltransferaseC7S10_16305Not AvailableNegative3344660 - 334528022342.6
inositol monophosphataseC7S10_16310Not AvailableNegative3345291 - 334606727114.8
alanine dehydrogenaseC7S10_16315Not AvailablePositive3346113 - 334744748503.0

Displaying genes 3201 – 3210 of 4293 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.