Stenotrophomonas sp. Nf4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas sp. Nf4 is characterized as a rod-shaped bacterium, which is a common morphological trait among various members of the Stenotrophomonas genus. The presence of flagella indicates that this species is likely motile, allowing it to move towards favorable environments or away from unfavorable conditions. This bacterium possesses a single replicon, which suggests a streamlined genetic organization. The accession number for Stenotrophomonas sp. Nf4 is PYTX00000000.1, providing a reference for its genomic sequence and related studies. Ecologically, members of the Stenotrophomonas genus are known for their versatility in various environments, often found in soil and water. They can also play a role in bioremediation and plant growth promotion. Understanding the traits of Stenotrophomonas sp. Nf4, including its morphology and motility, provides insight into its potential ecological roles and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas sp. Nf4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas sp. Nf4 NODE_102_length_202_cov_13.0408, whole

Gene Summary

Adenine Count

748389 bp

Thymine Count

753954 bp

Guanine Count

1511801 bp

Cytosine Count

1508553 bp

Genome Length

4522697 bp

Protein-coding Genes

4006 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system atpase tsshC9416_20210Not AvailableNegative4459201 - 446195499879.7
type vi secretion system baseplate subunit tssgC9416_20215Not AvailableNegative4462021 - 446311240761.1
type vi secretion system baseplate subunit tssfC9416_20220Not AvailableNegative4463076 - 446491168028.2
type vi secretion system baseplate subunit tsseC9416_20225Not AvailableNegative4464911 - 446539918006.4
type vi secretion system tube protein hcpC9416_20230Not AvailableNegative4465526 - 446602318055.2
type vi secretion system contractile sheath large subunitC9416_20235Not AvailableNegative4466170 - 446766054808.9
type vi secretion system contractile sheath small subunitC9416_20240Not AvailableNegative4467664 - 446816418905.7
hypothetical proteinC9416_20245Not AvailableNegative4468195 - 446881821699.9
type vi secretion system lipoprotein tssjC9416_20250Not AvailablePositive4469088 - 446968120689.9
type vi secretion system baseplate subunit tsskC9416_20255Not AvailablePositive4469898 - 447123249251.9

Displaying genes 3991 – 4000 of 4072 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.