Stenotrophomonas sp. Nf4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas sp. Nf4 is characterized as a rod-shaped bacterium, which is a common morphological trait among various members of the Stenotrophomonas genus. The presence of flagella indicates that this species is likely motile, allowing it to move towards favorable environments or away from unfavorable conditions. This bacterium possesses a single replicon, which suggests a streamlined genetic organization. The accession number for Stenotrophomonas sp. Nf4 is PYTX00000000.1, providing a reference for its genomic sequence and related studies. Ecologically, members of the Stenotrophomonas genus are known for their versatility in various environments, often found in soil and water. They can also play a role in bioremediation and plant growth promotion. Understanding the traits of Stenotrophomonas sp. Nf4, including its morphology and motility, provides insight into its potential ecological roles and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas sp. Nf4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas sp. Nf4 NODE_102_length_202_cov_13.0408, whole

Gene Summary

Adenine Count

748389 bp

Thymine Count

753954 bp

Guanine Count

1511801 bp

Cytosine Count

1508553 bp

Genome Length

4522697 bp

Protein-coding Genes

4006 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pteridine reductaseC9416_09230Not AvailablePositive2084621 - 208535826304.3
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseC9416_09235Not AvailableNegative2085419 - 208590417682.0
20s proteasome subunit a/bC9416_09240Not AvailablePositive2085998 - 208674127197.2
hybrid sensor histidine kinase/response regulatorC9416_09245Not AvailableNegative2087225 - 208873653928.1
two-component system response regulatorC9416_09250Not AvailableNegative2088741 - 208918116389.8
histidine kinaseC9416_09255Not AvailableNegative2089178 - 209099567557.9
bon domain-containing proteinC9416_09260Not AvailableNegative2091226 - 209160912863.2
oxidoreductaseC9416_09265Not AvailablePositive2091780 - 209282337744.0
6-phosphogluconate dehydrogenase (decarboxylating)C9416_09270Not AvailableNegative2093007 - 209391232360.7
hypothetical proteinC9416_09275Not AvailableNegative2093923 - 209516144530.0

Displaying genes 1821 – 1830 of 4072 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.