Vibrio cholerae strain UG042

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain UG042 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain is a heterotroph, indicating its reliance on organic compounds for energy. Vibrio cholerae strain UG042 thrives optimally at a temperature of 20.0°C, which suggests a preference for cooler environments, potentially influencing its distribution in aquatic habitats. As a facultative anaerobe, this strain can grow in both the presence and absence of oxygen, allowing it to inhabit diverse ecological niches. The ability to adapt to varying oxygen levels may contribute to its survival in fluctuating environmental conditions, such as those found in estuarine and freshwater ecosystems. Given its heterotrophic nature and versatility in energy utilization, Vibrio cholerae strain UG042 may play a significant role in nutrient cycling within its habitat, potentially contributing to the breakdown of organic matter. This trait underscores the importance of understanding the ecological dynamics of Vibrio species, as they may influence microbial community structure and function in their respective environments. Further studies could elucidate the specific roles of this strain within microbial assemblages, particularly in relation to its ecological interactions and contributions to biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae strain UG042
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio cholerae strain UG042

Accession NumberPYRF00000000.1

Gene Summary

Adenine Count

1065427 bp

Thymine Count

1058535 bp

Guanine Count

962567 bp

Cytosine Count

957779 bp

Genome Length

4044573 bp

Protein-coding Genes

3744 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
flagellar biosynthetic protein fliqC9J66_00335Not Available+54698 - 5496710316.3
flagellar type iii secretion system protein flirC9J66_00340Not Available+54976 - 5575828677.2
flagellar biosynthesis protein flhbC9J66_00345Not Available+55768 - 5689842072.2
endonuclease smrbC9J66_00350Not Available-56906 - 5746621480.6
50s ribosomal protein l3 n(5)-glutamine methyltransferaseC9J66_00355Not Available+57533 - 5846535153.9
hypothetical proteinC9J66_00360Not Available-58373 - 585979118.55
chorismate synthaseC9J66_00365Not Available+58695 - 5978039107.4
trimeric intracellular cation channel family proteinC9J66_00370Not Available-59862 - 6048522474.3
elongation factor p hydroxylaseC9J66_00375Not Available+60849 - 6137920452.3
yfcl family proteinC9J66_00380Not Available+61418 - 616819557.26

Displaying genes 71 – 80 of 3845 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites