Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | strain UG042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1065427 bp
Thymine Count
1058535 bp
Guanine Count
962567 bp
Cytosine Count
957779 bp
Genome Length
4044573 bp
Protein-coding Genes
3744 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| accessory colonization factor acfc | C9J66_12110 | Not Available | Positive | 2634591 - 2635361 | 28577.1 |
| rdd family protein | C9J66_12115 | Not Available | Positive | 2635377 - 2635850 | 18253.7 |
| m23 family peptidase | C9J66_12120 | Not Available | Positive | 2635859 - 2636767 | 34472.6 |
| accessory colonization factor acfa | C9J66_12125 | Not Available | Negative | 2636770 - 2637417 | 24699.1 |
| accessory colonization factor acfd | C9J66_12130 | Not Available | Positive | 2637590 - 2642152 | 167841.0 |
| preprotein translocase | C9J66_12135 | Not Available | Negative | 2642783 - 2643019 | 8625.49 |
| integrase | C9J66_12145 | Not Available | Negative | 2644067 - 2645335 | 48365.4 |
| Tmrna,resume consensus sequence (at 85): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 2645502 - 2645868 | Not Available |
| ssra-binding protein | C9J66_12155 | Not Available | Negative | 2645937 - 2646422 | 18637.7 |
| ubiquinone-binding protein | C9J66_12160 | Not Available | Positive | 2646606 - 2647040 | 15876.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |






