Vibrio cholerae strain UG042

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain UG042 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain is a heterotroph, indicating its reliance on organic compounds for energy. Vibrio cholerae strain UG042 thrives optimally at a temperature of 20.0°C, which suggests a preference for cooler environments, potentially influencing its distribution in aquatic habitats. As a facultative anaerobe, this strain can grow in both the presence and absence of oxygen, allowing it to inhabit diverse ecological niches. The ability to adapt to varying oxygen levels may contribute to its survival in fluctuating environmental conditions, such as those found in estuarine and freshwater ecosystems. Given its heterotrophic nature and versatility in energy utilization, Vibrio cholerae strain UG042 may play a significant role in nutrient cycling within its habitat, potentially contributing to the breakdown of organic matter. This trait underscores the importance of understanding the ecological dynamics of Vibrio species, as they may influence microbial community structure and function in their respective environments. Further studies could elucidate the specific roles of this strain within microbial assemblages, particularly in relation to its ecological interactions and contributions to biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae strain UG042
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio cholerae strain UG042

Accession NumberPYRF00000000.1

Gene Summary

Adenine Count

1065427 bp

Thymine Count

1058535 bp

Guanine Count

962567 bp

Cytosine Count

957779 bp

Genome Length

4044573 bp

Protein-coding Genes

3744 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Trna-metNot AvailableNot Available+1021 - 1097Not Available
redox-regulated atpase ychfC9J66_00050Not Available-1375 - 246639497.2
peptidyl-trna hydrolaseC9J66_00055Not Available-2477 - 306721484.2
16s ribosomal rnaNot AvailableNot Available+3607 - 5155Not Available
ribose-phosphate pyrophosphokinaseC9J66_00060Not Available-3236 - 418034016.1
4-diphosphocytidyl-2c-methyl-d-erythritol kinaseC9J66_00065Not Available-4211 - 509831975.1
outer membrane lipoprotein lolbC9J66_00070Not Available-5080 - 569723620.2
glutamyl-trna reductaseC9J66_00075Not Available+5856 - 711545747.1
peptide chain release factor 1C9J66_00080Not Available+7145 - 823340223.3
protein-(glutamine-n5) methyltransferase, release factor-specificC9J66_00085Not Available+8237 - 909731319.4

Displaying genes 11 – 20 of 3845 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites