Micromonospora sp. RP3T

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora sp. RP3T is a bacterial strain characterized by its possession of flagella, which contribute to its motility. The strain has a singular replicon, indicating a streamlined genetic structure that can impact its replication and genetic stability. The accession number for this strain is PYPS00000000.1, which serves as a reference for its genomic data. This species falls under the genus Micromonospora, known for its ecological roles in soil and its potential applications in biotechnology and pharmaceuticals, particularly in antibiotic production. The presence of flagella suggests that Micromonospora sp. RP3T may exhibit enhanced mobility in its environment, allowing it to navigate through soil and other substrates effectively. This motility can facilitate its interactions with other microorganisms and contribute to its survival and adaptability in diverse ecological niches. Given the unique traits of Micromonospora sp. RP3T, particularly its motility and genetic characteristics, it presents opportunities for further exploration in microbiological research and potential biotechnological applications. Understanding the ecological role of this strain could provide insights into microbial interactions within soil ecosystems and its contributions to nutrient cycling.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora sp. RP3T
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora sp. RP3T NODE_184_length_500_cov_0.84097, whole

Gene Summary

Adenine Count

956169 bp

Thymine Count

971228 bp

Guanine Count

2611764 bp

Cytosine Count

2595104 bp

Genome Length

7134265 bp

Protein-coding Genes

6078 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate dehydrogenase/fumarate reductase iron-sulfur subunitC8054_20515Not AvailableNegative4580463 - 458153339715.7
fumarate reductase/succinate dehydrogenase flavoprotein subunitC8054_20520Not AvailableNegative4581533 - 458344370010.0
hypothetical proteinC8054_20525Not AvailableNegative4583455 - 458426130947.7
peptidase u62C8054_20530Not AvailableNegative4584438 - 458585648550.0
peptidase u62C8054_20535Not AvailableNegative4585910 - 458734350749.7
uma2 family endonucleaseC8054_20540Not AvailableNegative4587377 - 458792520596.6
peptide abc transporter atp-binding proteinC8054_20545Not AvailablePositive4588166 - 458867618442.0
is5/is1182 family transposaseC8054_20550Not AvailablePositive4588677 - 45887904699.72
uracil-dna glycosylaseC8054_20555Not AvailablePositive4588885 - 458958325147.0
4a-hydroxytetrahydrobiopterin dehydrataseC8054_20560Not AvailableNegative4589961 - 459061723189.2

Displaying genes 4001 – 4010 of 6141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.