Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium leiognathi |
| Strain | strain ATCC 33979 CFSAN065438_114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430723 bp
Thymine Count
1425730 bp
Guanine Count
1005574 bp
Cytosine Count
1014105 bp
Genome Length
4876132 bp
Protein-coding Genes
4000 genes
Non-Coding Genes
156 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | CTM89_18300 | Not Available | Positive | 4067067 - 4067537 | 17368.2 |
| penicillin-binding protein 2 | CTM89_18305 | Not Available | Positive | 4067544 - 4069508 | 74500.0 |
| rod shape-determining protein roda | CTM89_18310 | Not Available | Positive | 4069505 - 4070626 | 40722.7 |
| septal ring lytic transglycosylase rlpa | CTM89_18315 | Not Available | Positive | 4070627 - 4071505 | 32722.1 |
| d-alanyl-d-alanine carboxypeptidase | CTM89_18320 | Not Available | Positive | 4071743 - 4072918 | 42825.4 |
| hypothetical protein | CTM89_18325 | Not Available | Positive | 4073122 - 4073397 | 10214.2 |
| lipoyl(octanoyl) transferase lipb | CTM89_18330 | Not Available | Positive | 4073583 - 4074233 | 24249.1 |
| lipoyl synthase | CTM89_18335 | Not Available | Positive | 4074230 - 4075201 | 36561.2 |
| outer membrane protein assembly factor bamc | CTM89_18340 | Not Available | Negative | 4075288 - 4076298 | 37487.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CTM89_18345 | Not Available | Negative | 4076330 - 4077208 | 31004.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


