Photobacterium leiognathi strain ATCC 33979 CFSAN065438_114

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium leiognathi strain ATCC 33979 CFSAN065438_114 is characterized as a rod-shaped bacterium. This strain possesses flagella, indicating that it has the capability for motility, which can play a significant role in its ecological interactions and behavior in various environments. The genome of this strain is represented by a single replicon, which is a feature that can influence its genetic stability and replication processes. The accession number for this strain is PYOJ00000000.1, providing a reference for its genetic sequence and related research. In terms of ecological insights, the motility conferred by its flagella may allow Photobacterium leiognathi to navigate its environment effectively, potentially influencing its role in marine ecosystems, where it is often found. Its rod shape and flagellated nature suggest adaptations for life in aquatic habitats, where movement can be crucial for accessing nutrients, avoiding predation, or interacting with other microbial communities. Overall, these traits collectively contribute to understanding the ecological niche of Photobacterium leiognathi and its potential functions in marine microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium leiognathi
Strainstrain ATCC 33979 CFSAN065438_114

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium leiognathi strain ATCC 33979 CFSAN065438_114, whole

Gene Summary

Adenine Count

1430723 bp

Thymine Count

1425730 bp

Guanine Count

1005574 bp

Cytosine Count

1014105 bp

Genome Length

4876132 bp

Protein-coding Genes

4000 genes

Non-Coding Genes

156 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavodoxin fldaCTM89_16810Not AvailablePositive3754614 - 375514119642.9
duf4442 domain-containing proteinCTM89_16815Not AvailableNegative3755203 - 375570019152.0
ferric iron uptake transcriptional regulatorCTM89_16820Not AvailablePositive3755896 - 375634216791.9
linear amide c-n hydrolaseCTM89_16825Not AvailablePositive3756488 - 375755239487.3
glutamine--trna ligaseCTM89_16830Not AvailableNegative3757617 - 375928163496.3
beta-n-acetylhexosaminidaseCTM89_16835Not AvailableNegative3759567 - 376223098137.4
pts glucose transporter subunit iibcCTM89_16840Not AvailableNegative3762401 - 376389152356.6
glucosamine-6-phosphate deaminaseCTM89_16845Not AvailablePositive3764149 - 376494929975.6
transcriptional regulatorCTM89_16850Not AvailablePositive3765382 - 376659643719.9
potassium transporter kefCTM89_16855Not AvailablePositive3766712 - 376830458230.5

Displaying genes 3281 – 3290 of 4156 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.