Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium leiognathi |
| Strain | strain ATCC 33979 CFSAN065438_114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430723 bp
Thymine Count
1425730 bp
Guanine Count
1005574 bp
Cytosine Count
1014105 bp
Genome Length
4876132 bp
Protein-coding Genes
4000 genes
Non-Coding Genes
156 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trkh family potassium uptake protein | CTM89_15620 | Not Available | Negative | 3450013 - 3451458 | 52174.6 |
| trk system potassium transporter trka | CTM89_15625 | Not Available | Negative | 3451464 - 3452840 | 50446.7 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | CTM89_15630 | Not Available | Negative | 3452963 - 3454243 | 47340.0 |
| methionyl-trna formyltransferase | CTM89_15635 | Not Available | Negative | 3454334 - 3455278 | 33802.6 |
| peptide deformylase | CTM89_15640 | Not Available | Negative | 3455295 - 3455804 | 18969.8 |
| lysm domain-containing protein | CTM89_15645 | Not Available | Positive | 3456162 - 3457223 | 39433.5 |
| dna-protecting protein dpra | CTM89_15650 | Not Available | Positive | 3457230 - 3458333 | 39681.6 |
| duf494 domain-containing protein | CTM89_15655 | Not Available | Positive | 3458330 - 3458806 | 18535.1 |
| dna topoisomerase | CTM89_15660 | Not Available | Positive | 3458871 - 3459446 | 21386.5 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | CTM89_15665 | Not Available | Negative | 3459502 - 3460620 | 40642.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


