Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium leiognathi |
| Strain | strain ATCC 33979 CFSAN065438_114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430723 bp
Thymine Count
1425730 bp
Guanine Count
1005574 bp
Cytosine Count
1014105 bp
Genome Length
4876132 bp
Protein-coding Genes
4000 genes
Non-Coding Genes
156 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0016 domain-containing protein | CTM89_15365 | Not Available | Negative | 3396606 - 3397163 | 19945.2 |
| ompa family lipoprotein | CTM89_15370 | Not Available | Negative | 3397460 - 3398149 | 23691.2 |
| glycine--trna ligase subunit alpha | CTM89_15375 | Not Available | Positive | 3398440 - 3399351 | 34788.4 |
| glycine--trna ligase subunit beta | CTM89_15380 | Not Available | Positive | 3399361 - 3401430 | 75577.7 |
| valine--pyruvate transaminase | CTM89_15385 | Not Available | Positive | 3401712 - 3402959 | 46077.7 |
| dna topoisomerase (atp-hydrolyzing) subunit b | CTM89_15390 | Not Available | Negative | 3403062 - 3405479 | 89631.2 |
| dna replication and repair protein recf | CTM89_15395 | Not Available | Negative | 3405499 - 3406581 | 40856.2 |
| dna polymerase iii subunit beta | CTM89_15400 | Not Available | Negative | 3406584 - 3407684 | 40821.7 |
| chromosomal replication initiator protein dnaa | CTM89_15405 | Not Available | Negative | 3407686 - 3409107 | 53514.9 |
| 50s ribosomal protein l34 | CTM89_15410 | Not Available | Positive | 3409872 - 3410009 | 5267.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


