Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium leiognathi |
| Strain | strain ATCC 33979 CFSAN065438_114 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430723 bp
Thymine Count
1425730 bp
Guanine Count
1005574 bp
Cytosine Count
1014105 bp
Genome Length
4876132 bp
Protein-coding Genes
4000 genes
Non-Coding Genes
156 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(13) synthase trud | CTM89_07925 | Not Available | Positive | 1761820 - 1762872 | 39326.7 |
| 5'/3'-nucleotidase sure | CTM89_07930 | Not Available | Positive | 1762853 - 1763602 | 27034.1 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | CTM89_07935 | Not Available | Positive | 1763605 - 1764234 | 23059.7 |
| lysm peptidoglycan-binding domain-containing protein | CTM89_07940 | Not Available | Positive | 1764256 - 1765098 | 30157.1 |
| rna polymerase sigma factor rpos | CTM89_07945 | Not Available | Positive | 1765182 - 1766183 | 37923.9 |
| dna mismatch repair protein muts | CTM89_07950 | Not Available | Negative | 1766294 - 1768873 | 95569.7 |
| nicotinamide-nucleotide amidase | CTM89_07955 | Not Available | Positive | 1769106 - 1769597 | 17270.4 |
| recombinase reca | CTM89_07960 | Not Available | Positive | 1769723 - 1770775 | 37691.3 |
| voltage-gated potassium channel protein | CTM89_07965 | Not Available | Positive | 1770957 - 1772186 | 44963.8 |
| alanine--trna ligase | CTM89_07970 | Not Available | Positive | 1772477 - 1775101 | 94692.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


