Photobacterium sp. GB-1 CFSAN065446_72

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium sp. GB-1, identified with the accession number PYOB00000000.1, is a marine bacterium notable for its possession of flagella, which suggests that it is motile. The presence of flagella is a significant trait as it enables the organism to navigate its aquatic environment, potentially aiding in nutrient acquisition and interaction with other microorganisms. The bacterium has a single replicon, indicating that it likely possesses a streamlined genetic organization that may facilitate efficient replication and adaptation in its ecological niche. This trait is often associated with bacteria that have specialized lifestyles, allowing them to thrive in specific environments without the genetic complexity that comes with multiple replicons. Understanding the characteristics of Photobacterium sp. GB-1 can provide insights into its role in marine ecosystems. Bacteria of the Photobacterium genus are often involved in bioluminescence and can play a significant role in the nutrient cycling within their habitats. Their motility could enhance their ability to interact with various substrates and other microorganisms, influencing community dynamics in marine environments. Therefore, the study of Photobacterium sp. GB-1 contributes to a broader understanding of microbial life in oceanic systems and its ecological implications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium sp. GB-1
StrainCFSAN065446_72

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium sp. GB-1 CFSAN065446_72, whole genome shotgun

Gene Summary

Adenine Count

1393559 bp

Thymine Count

1393973 bp

Guanine Count

938498 bp

Cytosine Count

923767 bp

Genome Length

4649797 bp

Protein-coding Genes

4042 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i-f crispr-associated protein csy2C9J45_01005Not AvailablePositive237535 - 23847635217.7
type i-f crispr-associated protein csy3C9J45_01010Not AvailablePositive238490 - 23947336621.6
type i-f crispr-associated endoribonuclease cas6/csy4C9J45_01015Not AvailablePositive239475 - 24002920954.6
Trna-serNot AvailableNot AvailablePositive242468 - 242558Not Available
Trna-serNot AvailableNot AvailablePositive242588 - 242675Not Available
miniconductance mechanosensitive channel mscmC9J45_01030Not AvailablePositive242899 - 246189125720.0
rtx toxinC9J45_01035Not AvailablePositive246518 - 257875400807.0
rtx toxinC9J45_01040Not AvailablePositive258250 - 267429324870.0
type i secretion system permease/atpaseC9J45_01045Not AvailablePositive267437 - 26961780389.4
hlyd family type i secretion periplasmic adaptor subunitC9J45_01050Not AvailablePositive269607 - 27092649161.2

Displaying genes 211 – 220 of 4195 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.