Photobacterium sp. GB-1 CFSAN065446_72

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium sp. GB-1, identified with the accession number PYOB00000000.1, is a marine bacterium notable for its possession of flagella, which suggests that it is motile. The presence of flagella is a significant trait as it enables the organism to navigate its aquatic environment, potentially aiding in nutrient acquisition and interaction with other microorganisms. The bacterium has a single replicon, indicating that it likely possesses a streamlined genetic organization that may facilitate efficient replication and adaptation in its ecological niche. This trait is often associated with bacteria that have specialized lifestyles, allowing them to thrive in specific environments without the genetic complexity that comes with multiple replicons. Understanding the characteristics of Photobacterium sp. GB-1 can provide insights into its role in marine ecosystems. Bacteria of the Photobacterium genus are often involved in bioluminescence and can play a significant role in the nutrient cycling within their habitats. Their motility could enhance their ability to interact with various substrates and other microorganisms, influencing community dynamics in marine environments. Therefore, the study of Photobacterium sp. GB-1 contributes to a broader understanding of microbial life in oceanic systems and its ecological implications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium sp. GB-1
StrainCFSAN065446_72

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium sp. GB-1 CFSAN065446_72, whole genome shotgun

Gene Summary

Adenine Count

1393559 bp

Thymine Count

1393973 bp

Guanine Count

938498 bp

Cytosine Count

923767 bp

Genome Length

4649797 bp

Protein-coding Genes

4042 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding response regulatorC9J45_00715Not AvailablePositive163955 - 16462625190.5
sensor histidine kinaseC9J45_00720Not AvailablePositive164595 - 16584548513.4
lipocalinC9J45_00725Not AvailablePositive165856 - 16638020211.2
diguanylate phosphodiesteraseC9J45_00730Not AvailableNegative166412 - 16842774669.9
3-phosphoserine/phosphohydroxythreonine transaminaseC9J45_00735Not AvailableNegative168621 - 16970339655.5
dna gyrase subunit aC9J45_00740Not AvailableNegative170138 - 17280498663.0
bifunctional 3-demethylubiquinol 3-o-methyltransferase/2-polyprenyl-6-hydroxyphenol methylaseC9J45_00745Not AvailablePositive173568 - 17427826304.6
ribonucleoside-diphosphate reductase subunit alphaC9J45_00750Not AvailablePositive174831 - 17709884979.9
ribonucleotide-diphosphate reductase subunit betaC9J45_00755Not AvailablePositive177144 - 17827743308.1
(2fe-2s)-binding proteinC9J45_00760Not AvailablePositive178274 - 17857010901.1

Displaying genes 151 – 160 of 4195 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.