Photobacterium sp. GB-1 CFSAN065446_72

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium sp. GB-1, identified with the accession number PYOB00000000.1, is a marine bacterium notable for its possession of flagella, which suggests that it is motile. The presence of flagella is a significant trait as it enables the organism to navigate its aquatic environment, potentially aiding in nutrient acquisition and interaction with other microorganisms. The bacterium has a single replicon, indicating that it likely possesses a streamlined genetic organization that may facilitate efficient replication and adaptation in its ecological niche. This trait is often associated with bacteria that have specialized lifestyles, allowing them to thrive in specific environments without the genetic complexity that comes with multiple replicons. Understanding the characteristics of Photobacterium sp. GB-1 can provide insights into its role in marine ecosystems. Bacteria of the Photobacterium genus are often involved in bioluminescence and can play a significant role in the nutrient cycling within their habitats. Their motility could enhance their ability to interact with various substrates and other microorganisms, influencing community dynamics in marine environments. Therefore, the study of Photobacterium sp. GB-1 contributes to a broader understanding of microbial life in oceanic systems and its ecological implications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium sp. GB-1
StrainCFSAN065446_72

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium sp. GB-1 CFSAN065446_72, whole genome shotgun

Gene Summary

Adenine Count

1393559 bp

Thymine Count

1393973 bp

Guanine Count

938498 bp

Cytosine Count

923767 bp

Genome Length

4649797 bp

Protein-coding Genes

4042 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide abc transporter atp-binding proteinC9J45_00665Not AvailablePositive154416 - 15524030829.7
orotidine-5'-phosphate decarboxylaseC9J45_00670Not AvailableNegative155303 - 15601325486.8
lipopolysaccharide assembly protein lapbC9J45_00675Not AvailableNegative156167 - 15733644511.7
duf1049 domain-containing proteinC9J45_00680Not AvailableNegative157343 - 15762710353.0
integration host factor subunit betaC9J45_00685Not AvailableNegative157757 - 15804710765.9
30s ribosomal protein s1C9J45_00690Not AvailableNegative158127 - 15979760704.0
(d)cmp kinaseC9J45_00695Not AvailableNegative159921 - 16059824437.4
3-phosphoshikimate 1-carboxyvinyltransferaseC9J45_00700Not AvailableNegative160815 - 16209545868.0
adp-ribose pyrophosphataseC9J45_00705Not AvailablePositive162258 - 16268316056.0
hypothetical proteinC9J45_00710Not AvailableNegative162727 - 16386341725.1

Displaying genes 141 – 150 of 4195 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.