Photobacterium sp. GB-1 CFSAN065446_72

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium sp. GB-1, identified with the accession number PYOB00000000.1, is a marine bacterium notable for its possession of flagella, which suggests that it is motile. The presence of flagella is a significant trait as it enables the organism to navigate its aquatic environment, potentially aiding in nutrient acquisition and interaction with other microorganisms. The bacterium has a single replicon, indicating that it likely possesses a streamlined genetic organization that may facilitate efficient replication and adaptation in its ecological niche. This trait is often associated with bacteria that have specialized lifestyles, allowing them to thrive in specific environments without the genetic complexity that comes with multiple replicons. Understanding the characteristics of Photobacterium sp. GB-1 can provide insights into its role in marine ecosystems. Bacteria of the Photobacterium genus are often involved in bioluminescence and can play a significant role in the nutrient cycling within their habitats. Their motility could enhance their ability to interact with various substrates and other microorganisms, influencing community dynamics in marine environments. Therefore, the study of Photobacterium sp. GB-1 contributes to a broader understanding of microbial life in oceanic systems and its ecological implications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium sp. GB-1
StrainCFSAN065446_72

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium sp. GB-1 CFSAN065446_72, whole genome shotgun

Gene Summary

Adenine Count

1393559 bp

Thymine Count

1393973 bp

Guanine Count

938498 bp

Cytosine Count

923767 bp

Genome Length

4649797 bp

Protein-coding Genes

4042 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorC9J45_05075Not AvailablePositive1143589 - 114393913103.9
hypothetical proteinC9J45_05080Not AvailablePositive1144504 - 1151643259408.0
transcriptional regulatorC9J45_05090Not AvailablePositive1151948 - 115229813127.0
nad(p)h dehydrogenaseC9J45_05095Not AvailablePositive1152351 - 115292021811.7
lema family proteinC9J45_05100Not AvailableNegative1153043 - 115379227267.3
sporulation control protein spo0mC9J45_05105Not AvailableNegative1154277 - 115502027438.5
glutathione-dependent reductaseC9J45_05110Not AvailablePositive1155284 - 115627337387.0
phosphataseC9J45_05115Not AvailableNegative1156342 - 115699224001.8
cai-1 autoinducer synthaseC9J45_05120Not AvailablePositive1157249 - 115837341414.4
hybrid sensor histidine kinase/response regulatorC9J45_05125Not AvailableNegative1158436 - 116046378129.4

Displaying genes 1011 – 1020 of 4195 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.