Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium phosphoreum |
| Strain | strain AK-5 CFSAN065477_180 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | ground beef; steak tartare |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1460444 bp
Thymine Count
1466066 bp
Guanine Count
950381 bp
Cytosine Count
946312 bp
Genome Length
4823203 bp
Protein-coding Genes
4255 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein hu-beta | C9J21_03495 | Not Available | Negative | 754411 - 754683 | 9426.26 |
| endopeptidase la | C9J21_03500 | Not Available | Negative | 754910 - 757273 | 87811.5 |
| atp-dependent clp protease atp-binding subunit clpx | C9J21_03505 | Not Available | Negative | 757483 - 758766 | 46782.0 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | C9J21_03510 | Not Available | Negative | 758879 - 759502 | 22882.6 |
| trigger factor | C9J21_03515 | Not Available | Negative | 759608 - 760906 | 47430.7 |
| hypothetical protein | C9J21_03520 | Not Available | Negative | 761484 - 761684 | 7053.33 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | C9J21_03525 | Not Available | Positive | 762265 - 763122 | 30719.3 |
| transcription/translation regulatory transformer protein rfah | C9J21_03530 | Not Available | Negative | 763199 - 763702 | 19330.2 |
| dipeptide/tripeptide permease | C9J21_03535 | Not Available | Positive | 764148 - 765542 | 49823.5 |
| two-component system response regulator | C9J21_03540 | Not Available | Negative | 765766 - 766815 | 38506.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


