Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium phosphoreum |
| Strain | strain AK-5 CFSAN065477_180 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | ground beef; steak tartare |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1460444 bp
Thymine Count
1466066 bp
Guanine Count
950381 bp
Cytosine Count
946312 bp
Genome Length
4823203 bp
Protein-coding Genes
4255 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | C9J21_20865 | Not Available | Positive | 4524956 - 4526044 | 39463.3 |
| 3-isopropylmalate dehydratase large subunit | C9J21_20870 | Not Available | Positive | 4526056 - 4527498 | 51339.3 |
| 3-isopropylmalate dehydratase small subunit | C9J21_20875 | Not Available | Positive | 4527513 - 4528115 | 22515.7 |
| duf547 domain-containing protein | C9J21_20880 | Not Available | Positive | 4528242 - 4529024 | 30327.1 |
| thiamine abc transporter substrate binding subunit | C9J21_20885 | Not Available | Positive | 4529313 - 4530275 | 35982.6 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | C9J21_20890 | Not Available | Positive | 4530288 - 4531895 | 59119.5 |
| thiamine abc transporter atp-binding protein | C9J21_20895 | Not Available | Positive | 4531888 - 4532616 | 26977.6 |
| ribonuclease | C9J21_20900 | Not Available | Negative | 4532720 - 4534096 | 51408.5 |
| rna polymerase-associated protein rapa | C9J21_20905 | Not Available | Positive | 4534422 - 4537343 | 109937.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | C9J21_20910 | Not Available | Positive | 4537501 - 4538199 | 26240.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


