Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium phosphoreum |
| Strain | strain AK-5 CFSAN065477_180 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | ground beef; steak tartare |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1460444 bp
Thymine Count
1466066 bp
Guanine Count
950381 bp
Cytosine Count
946312 bp
Genome Length
4823203 bp
Protein-coding Genes
4255 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxidase | C9J21_01580 | Not Available | Negative | 342313 - 342924 | 22425.6 |
| lysr family transcriptional regulator | C9J21_01585 | Not Available | Positive | 343056 - 343958 | 33194.7 |
| malate synthase a | C9J21_01590 | Not Available | Positive | 344648 - 346261 | 60896.9 |
| isocitrate lyase | C9J21_01595 | Not Available | Positive | 346299 - 347606 | 47883.2 |
| acetoin utilization protein acub | C9J21_01600 | Not Available | Negative | 347668 - 348177 | 19041.8 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | C9J21_01605 | Not Available | Positive | 348450 - 349502 | 39029.6 |
| trna guanosine(34) transglycosylase tgt | C9J21_01610 | Not Available | Positive | 349755 - 350924 | 44182.1 |
| preprotein translocase subunit yajc | C9J21_01615 | Not Available | Positive | 350951 - 351289 | 12277.1 |
| protein translocase subunit secd | C9J21_01620 | Not Available | Positive | 351327 - 353180 | 67098.9 |
| protein translocase subunit secf | C9J21_01625 | Not Available | Positive | 353193 - 354140 | 34254.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


