Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium phosphoreum |
| Strain | strain AK-5 CFSAN065477_180 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | ground beef; steak tartare |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1460444 bp
Thymine Count
1466066 bp
Guanine Count
950381 bp
Cytosine Count
946312 bp
Genome Length
4823203 bp
Protein-coding Genes
4255 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voltage-gated potassium channel | C9J21_14340 | Not Available | Negative | 3123223 - 3124452 | 45073.1 |
| recombinase reca | C9J21_14345 | Not Available | Negative | 3124678 - 3125730 | 37454.2 |
| nicotinamide-nucleotide amidase | C9J21_14350 | Not Available | Negative | 3125857 - 3126354 | 17446.6 |
| dna mismatch repair protein muts | C9J21_14355 | Not Available | Positive | 3126567 - 3129149 | 95584.1 |
| rna polymerase sigma factor rpos | C9J21_14360 | Not Available | Negative | 3129329 - 3130321 | 37530.4 |
| hypothetical protein | C9J21_14365 | Not Available | Negative | 3130411 - 3131280 | 31316.0 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | C9J21_14370 | Not Available | Negative | 3131302 - 3131931 | 23012.7 |
| 5'/3'-nucleotidase sure | C9J21_14375 | Not Available | Negative | 3131934 - 3132683 | 26890.2 |
| trna pseudouridine(13) synthase trud | C9J21_14380 | Not Available | Negative | 3132661 - 3133716 | 39524.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | C9J21_14385 | Not Available | Negative | 3133754 - 3134227 | 16496.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


