Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium phosphoreum |
| Strain | strain AK-5 CFSAN065477_180 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | ground beef; steak tartare |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1460444 bp
Thymine Count
1466066 bp
Guanine Count
950381 bp
Cytosine Count
946312 bp
Genome Length
4823203 bp
Protein-coding Genes
4255 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yicc family protein | C9J21_13990 | Not Available | Positive | 3057933 - 3058796 | 32928.6 |
| guanylate kinase | C9J21_13995 | Not Available | Positive | 3059008 - 3059634 | 23687.0 |
| dna-directed rna polymerase subunit omega | C9J21_14000 | Not Available | Positive | 3059686 - 3059964 | 10280.2 |
| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | C9J21_14005 | Not Available | Positive | 3059980 - 3062082 | 78895.3 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | C9J21_14010 | Not Available | Positive | 3062207 - 3062935 | 26813.4 |
| atp-dependent dna helicase recg | C9J21_14015 | Not Available | Positive | 3062938 - 3065019 | 76629.8 |
| uracil-xanthine permease | C9J21_14020 | Not Available | Positive | 3065291 - 3066700 | 49321.3 |
| two-component system sensor histidine kinase envz | C9J21_14025 | Not Available | Negative | 3066790 - 3068124 | 49532.8 |
| two-component system response regulator ompr | C9J21_14030 | Not Available | Negative | 3068128 - 3068847 | 27331.4 |
| transcription elongation factor greb | C9J21_14035 | Not Available | Positive | 3069264 - 3069737 | 18578.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


