Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium phosphoreum |
| Strain | strain AK-5 CFSAN065477_180 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | ground beef; steak tartare |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1460444 bp
Thymine Count
1466066 bp
Guanine Count
950381 bp
Cytosine Count
946312 bp
Genome Length
4823203 bp
Protein-coding Genes
4255 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system transcriptional repressor | C9J21_12910 | Not Available | Negative | 2854345 - 2854881 | 19752.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | C9J21_12915 | Not Available | Positive | 2855238 - 2856116 | 31294.8 |
| outer membrane protein assembly factor bamc | C9J21_12920 | Not Available | Positive | 2856168 - 2857178 | 37858.2 |
| lipoyl synthase | C9J21_12925 | Not Available | Negative | 2857279 - 2858250 | 36476.1 |
| octanoyltransferase | C9J21_12930 | Not Available | Negative | 2858247 - 2858897 | 24400.4 |
| hypothetical protein | C9J21_12935 | Not Available | Negative | 2859140 - 2859415 | 10187.3 |
| d-alanyl-d-alanine carboxypeptidase | C9J21_12940 | Not Available | Negative | 2859635 - 2860807 | 43014.8 |
| septal ring lytic transglycosylase rlpa | C9J21_12945 | Not Available | Negative | 2861037 - 2861909 | 32786.5 |
| rod shape-determining protein roda | C9J21_12950 | Not Available | Negative | 2861913 - 2863034 | 40650.5 |
| penicillin-binding protein 2 | C9J21_12955 | Not Available | Negative | 2863034 - 2864989 | 73962.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


