Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium phosphoreum |
| Strain | strain AK-5 CFSAN065477_180 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | ground beef; steak tartare |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1460444 bp
Thymine Count
1466066 bp
Guanine Count
950381 bp
Cytosine Count
946312 bp
Genome Length
4823203 bp
Protein-coding Genes
4255 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9J21_01030 | Not Available | Positive | 219539 - 219868 | 12286.7 |
| type iii effector | C9J21_01035 | Not Available | Negative | 219919 - 220278 | 13837.3 |
| duf2750 domain-containing protein | C9J21_01040 | Not Available | Negative | 220355 - 220747 | 15089.7 |
| sigma-54-dependent fis family transcriptional regulator | C9J21_01045 | Not Available | Positive | 221158 - 222504 | 50605.7 |
| endonuclease | C9J21_01050 | Not Available | Negative | 222520 - 223470 | 36346.8 |
| ggdef domain-containing protein | C9J21_01055 | Not Available | Negative | 223589 - 224701 | 42480.8 |
| anaerobic ribonucleoside-triphosphate reductase | C9J21_01060 | Not Available | Positive | 225022 - 227157 | 79518.1 |
| anaerobic ribonucleotide reductase-activating protein | C9J21_01065 | Not Available | Positive | 227269 - 227748 | 18136.5 |
| diguanylate phosphodiesterase | C9J21_01070 | Not Available | Positive | 228102 - 230156 | 76402.4 |
| duf2960 domain-containing protein | C9J21_01075 | Not Available | Positive | 230258 - 230521 | 9948.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


