Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium phosphoreum |
| Strain | strain AK-5 CFSAN065477_180 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | ground beef; steak tartare |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1460444 bp
Thymine Count
1466066 bp
Guanine Count
950381 bp
Cytosine Count
946312 bp
Genome Length
4823203 bp
Protein-coding Genes
4255 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | C9J21_12040 | Not Available | Positive | 2675566 - 2676105 | 19452.7 |
| duf1488 domain-containing protein | C9J21_12045 | Not Available | Negative | 2676129 - 2676395 | 10146.8 |
| shikimate dehydrogenase | C9J21_12050 | Not Available | Negative | 2676403 - 2677224 | 29785.8 |
| oxygen-dependent coproporphyrinogen oxidase | C9J21_12055 | Not Available | Negative | 2677305 - 2678225 | 35166.1 |
| trna threonylcarbamoyladenosine biosynthesis protein rimn | C9J21_12060 | Not Available | Negative | 2678229 - 2678786 | 19952.9 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | C9J21_12065 | Not Available | Positive | 2678981 - 2679469 | 16864.5 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | C9J21_12070 | Not Available | Positive | 2679469 - 2680587 | 40471.0 |
| dna topoisomerase | C9J21_12075 | Not Available | Negative | 2680648 - 2681208 | 20940.2 |
| duf494 domain-containing protein | C9J21_12080 | Not Available | Negative | 2681211 - 2681684 | 18323.8 |
| dna-protecting protein dpra | C9J21_12085 | Not Available | Negative | 2681687 - 2682787 | 39182.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


