Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium phosphoreum |
| Strain | strain AK-5 CFSAN065477_180 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | ground beef; steak tartare |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1460444 bp
Thymine Count
1466066 bp
Guanine Count
950381 bp
Cytosine Count
946312 bp
Genome Length
4823203 bp
Protein-coding Genes
4255 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor ts | C9J21_11125 | Not Available | Positive | 2490440 - 2491285 | 29822.9 |
| ump kinase | C9J21_11130 | Not Available | Positive | 2491375 - 2492103 | 26212.9 |
| ribosome recycling factor | C9J21_11135 | Not Available | Positive | 2492171 - 2492728 | 20812.2 |
| di-trans,poly-cis-decaprenylcistransferase | C9J21_11140 | Not Available | Positive | 2492806 - 2493567 | 28587.5 |
| cdp-diglyceride synthetase | C9J21_11145 | Not Available | Positive | 2493670 - 2494518 | 30638.4 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | C9J21_11150 | Not Available | Positive | 2494591 - 2495787 | 42590.6 |
| sigma e protease regulator rsep | C9J21_11155 | Not Available | Positive | 2495784 - 2497139 | 49005.2 |
| outer membrane protein assembly factor bama | C9J21_11160 | Not Available | Positive | 2497176 - 2499581 | 89680.2 |
| molecular chaperone | C9J21_11165 | Not Available | Positive | 2499599 - 2500108 | 18860.0 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | C9J21_11170 | Not Available | Positive | 2500211 - 2501239 | 36274.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


