Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium phosphoreum |
| Strain | strain AK-5 CFSAN065477_180 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | ground beef; steak tartare |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1460444 bp
Thymine Count
1466066 bp
Guanine Count
950381 bp
Cytosine Count
946312 bp
Genome Length
4823203 bp
Protein-coding Genes
4255 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pils | C9J21_09750 | Not Available | Positive | 2211983 - 2212594 | 22903.5 |
| fimbrial protein | C9J21_09755 | Not Available | Positive | 2212587 - 2213171 | 22333.9 |
| pilus assembly protein pilq | C9J21_09760 | Not Available | Positive | 2213182 - 2213697 | 19059.5 |
| type iv pilus secretin pilq | C9J21_09765 | Not Available | Positive | 2213711 - 2215441 | 62779.4 |
| shikimate kinase arok | C9J21_09770 | Not Available | Positive | 2215827 - 2216345 | 19476.1 |
| 3-dehydroquinate synthase | C9J21_09775 | Not Available | Positive | 2216369 - 2217448 | 38720.7 |
| cell division protein damx | C9J21_09780 | Not Available | Positive | 2217463 - 2218944 | 53770.5 |
| adenine-specific dna-methyltransferase | C9J21_09785 | Not Available | Positive | 2219053 - 2219889 | 31835.6 |
| ribulose phosphate epimerase | C9J21_09790 | Not Available | Negative | 2219899 - 2220096 | 6993.75 |
| ribulose-phosphate 3-epimerase | C9J21_09795 | Not Available | Positive | 2220298 - 2220972 | 24393.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


