Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium phosphoreum |
| Strain | strain AK-5 CFSAN065477_180 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | ground beef; steak tartare |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1460444 bp
Thymine Count
1466066 bp
Guanine Count
950381 bp
Cytosine Count
946312 bp
Genome Length
4823203 bp
Protein-coding Genes
4255 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | C9J21_08275 | Not Available | Negative | 1889092 - 1889904 | 29808.4 |
| lysr family transcriptional regulator | C9J21_08280 | Not Available | Positive | 1890006 - 1890893 | 33786.5 |
| hypothetical protein | C9J21_08285 | Not Available | Positive | 1891580 - 1892215 | 23826.3 |
| hypothetical protein | C9J21_08290 | Not Available | Negative | 1892306 - 1894048 | 64853.9 |
| hydrogenase expression/formation protein | C9J21_08295 | Not Available | Negative | 1894045 - 1894590 | 20090.3 |
| ni/fe-hydrogenase, b-type cytochrome subunit | C9J21_08300 | Not Available | Negative | 1894596 - 1895342 | 28489.8 |
| hydrogenase 2 large subunit | C9J21_08305 | Not Available | Negative | 1895356 - 1897059 | 62651.4 |
| hydrogenase | C9J21_08310 | Not Available | Negative | 1897063 - 1898199 | 40779.7 |
| molecular chaperone tord | C9J21_08315 | Not Available | Negative | 1898630 - 1899277 | 24492.3 |
| trimethylamine-n-oxide reductase tora | C9J21_08320 | Not Available | Negative | 1899430 - 1901958 | 93494.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


