Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium phosphoreum |
| Strain | strain AK-5 CFSAN065477_180 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | ground beef; steak tartare |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1460444 bp
Thymine Count
1466066 bp
Guanine Count
950381 bp
Cytosine Count
946312 bp
Genome Length
4823203 bp
Protein-coding Genes
4255 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | C9J21_07470 | Not Available | Positive | 1695457 - 1698180 | 99503.4 |
| 30s ribosome-binding factor rbfa | C9J21_07475 | Not Available | Positive | 1698279 - 1698680 | 15242.2 |
| trna pseudouridine(55) synthase trub | C9J21_07480 | Not Available | Positive | 1698683 - 1699630 | 34748.7 |
| 30s ribosomal protein s15 | C9J21_07485 | Not Available | Positive | 1699829 - 1700098 | 10288.4 |
| polyribonucleotide nucleotidyltransferase | C9J21_07490 | Not Available | Positive | 1700491 - 1702614 | 76594.9 |
| lipoprotein nlpi | C9J21_07495 | Not Available | Positive | 1702726 - 1703622 | 34361.6 |
| u32 family peptidase | C9J21_07500 | Not Available | Negative | 1703688 - 1704563 | 32852.3 |
| protease | C9J21_07505 | Not Available | Negative | 1704574 - 1705581 | 37179.1 |
| c-di-gmp phosphodiesterase | C9J21_07510 | Not Available | Negative | 1705722 - 1707761 | 77023.7 |
| scp2 domain-containing protein | C9J21_07515 | Not Available | Positive | 1707982 - 1708503 | 19952.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


