Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium phosphoreum |
| Strain | strain AK-5 CFSAN065477_180 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | ground beef; steak tartare |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1460444 bp
Thymine Count
1466066 bp
Guanine Count
950381 bp
Cytosine Count
946312 bp
Genome Length
4823203 bp
Protein-coding Genes
4255 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | C9J21_06455 | Not Available | Negative | 1452976 - 1454112 | 41940.9 |
| cytochrome d terminal oxidase subunit 1 | C9J21_06460 | Not Available | Negative | 1454131 - 1455717 | 58936.2 |
| holliday junction branch migration dna helicase ruvb | C9J21_06465 | Not Available | Negative | 1456722 - 1457738 | 37675.5 |
| holliday junction branch migration protein ruva | C9J21_06470 | Not Available | Negative | 1457766 - 1458389 | 22556.6 |
| crossover junction endodeoxyribonuclease ruvc | C9J21_06475 | Not Available | Negative | 1458607 - 1459128 | 18338.4 |
| aspartate--trna ligase | C9J21_06480 | Not Available | Negative | 1459362 - 1461143 | 66332.5 |
| hypothetical protein | C9J21_06485 | Not Available | Positive | 1461488 - 1462363 | 33246.8 |
| trna (cmo5u34)-methyltransferase | C9J21_06490 | Not Available | Positive | 1462538 - 1463266 | 27362.8 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | C9J21_06495 | Not Available | Positive | 1463283 - 1464257 | 37507.0 |
| hypothetical protein | C9J21_06500 | Not Available | Positive | 1464347 - 1465153 | 30150.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


