Photobacterium damselae strain BT-6 CFSAN065500_43

CoccusMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium damselae strain BT-6 (CFSAN065500_43) is a Gram-negative, coccus-shaped bacterium primarily found in marine environments, specifically within Italian aquaculture settings. This strain is characterized by its motility, which is facilitated by the presence of flagella, allowing it to navigate its aquatic habitat effectively. P. damselae is classified as mesophilic, indicating that it thrives within a moderate temperature range, though specific temperature limits are not provided in the data. The bacterium is notable for having a single replicon, which suggests a streamlined genomic organization. This strain is known to infect various hosts, including Homo sapiens (humans) and Alca torda (the razorbill), where it can cause soft-tissue infections. The health implications of P. damselae infections in humans underscore its significance in both aquaculture and public health contexts. The ecological role of Photobacterium damselae in marine environments is likely tied to its interactions with aquatic organisms and its potential impact on fish health in aquaculture. By understanding its pathogenic potential and ecological interactions, effective strategies could be developed to manage its presence and mitigate health risks in both marine ecosystems and human populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium damselae
Strainstrain BT-6 CFSAN065500_43

Profile

Physiology
Gram staining propertiesNegative
ShapeCoccus
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Photobacterium damselae strain BT-6 CFSAN065500_43
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangemesophilic
HabitatItalian aquaculture; Marine
Biotic relationshipNot Available
Host(s)Homo sapiens, Alca torda
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium damselae strain BT-6 CFSAN065500_43, whole genome

Gene Summary

Adenine Count

1317805 bp

Thymine Count

1343305 bp

Guanine Count

924455 bp

Cytosine Count

882234 bp

Genome Length

4467799 bp

Protein-coding Genes

3795 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding protein/permeaseCTM90_04785Not AvailableNegative1130950 - 113269866586.0
3-phosphoserine/phosphohydroxythreonine transaminaseCTM90_04790Not AvailableNegative1132842 - 113392439778.6
dna topoisomerase (atp-hydrolyzing) subunit aCTM90_04795Not AvailableNegative1134139 - 113676097055.1
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigCTM90_04800Not AvailablePositive1137421 - 113813126258.7
ribonucleoside-diphosphate reductase subunit alphaCTM90_04805Not AvailablePositive1138617 - 114088485011.9
ribonucleotide-diphosphate reductase subunit betaCTM90_04810Not AvailablePositive1140931 - 114206443377.2
(2fe-2s)-binding proteinCTM90_04815Not AvailablePositive1142061 - 114235110637.8
arginine decarboxylaseCTM90_04820Not AvailableNegative1142399 - 114469085382.4
putrescine-ornithine antiporterCTM90_04825Not AvailableNegative1144761 - 114610147740.9
meta domain-containing proteinCTM90_04830Not AvailableNegative1146399 - 114727431390.6

Displaying genes 971 – 980 of 3954 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Soft-tissue infectionCausesPMC8231020

Displaying health effects 1 – 1 of 1 in total