Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein/permease | CTM90_04785 | Not Available | Negative | 1130950 - 1132698 | 66586.0 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | CTM90_04790 | Not Available | Negative | 1132842 - 1133924 | 39778.6 |
| dna topoisomerase (atp-hydrolyzing) subunit a | CTM90_04795 | Not Available | Negative | 1134139 - 1136760 | 97055.1 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | CTM90_04800 | Not Available | Positive | 1137421 - 1138131 | 26258.7 |
| ribonucleoside-diphosphate reductase subunit alpha | CTM90_04805 | Not Available | Positive | 1138617 - 1140884 | 85011.9 |
| ribonucleotide-diphosphate reductase subunit beta | CTM90_04810 | Not Available | Positive | 1140931 - 1142064 | 43377.2 |
| (2fe-2s)-binding protein | CTM90_04815 | Not Available | Positive | 1142061 - 1142351 | 10637.8 |
| arginine decarboxylase | CTM90_04820 | Not Available | Negative | 1142399 - 1144690 | 85382.4 |
| putrescine-ornithine antiporter | CTM90_04825 | Not Available | Negative | 1144761 - 1146101 | 47740.9 |
| meta domain-containing protein | CTM90_04830 | Not Available | Negative | 1146399 - 1147274 | 31390.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

