Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit beta | CTM90_04735 | Not Available | Negative | 1121288 - 1121575 | 10792.0 |
| 30s ribosomal protein s1 | CTM90_04740 | Not Available | Negative | 1121664 - 1123334 | 60614.9 |
| (d)cmp kinase | CTM90_04745 | Not Available | Negative | 1123459 - 1124136 | 24431.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | CTM90_04750 | Not Available | Negative | 1124420 - 1125700 | 46260.3 |
| nudix domain-containing protein | CTM90_04755 | Not Available | Positive | 1125831 - 1126271 | 16334.4 |
| hypothetical protein | CTM90_04760 | Not Available | Negative | 1126366 - 1127046 | 24253.5 |
| hypothetical protein | CTM90_04765 | Not Available | Negative | 1127203 - 1128363 | 41759.9 |
| dna-binding response regulator | CTM90_04770 | Not Available | Positive | 1128457 - 1129125 | 25270.6 |
| sensor histidine kinase | CTM90_04775 | Not Available | Positive | 1129097 - 1130344 | 47987.8 |
| lipocalin | CTM90_04780 | Not Available | Positive | 1130363 - 1130953 | 22590.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

