Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein pspa | CTM90_04685 | Not Available | Negative | 1111237 - 1111902 | 25376.1 |
| phage shock protein operon transcriptional activator | CTM90_04690 | Not Available | Positive | 1112136 - 1113143 | 37982.2 |
| peptide abc transporter substrate-binding protein sapa | CTM90_04695 | Not Available | Positive | 1113289 - 1114908 | 60451.8 |
| antimicrobial peptide abc transporter permease sapb | CTM90_04700 | Not Available | Positive | 1114912 - 1115874 | 35815.2 |
| peptide abc transporter permease sapc | CTM90_04705 | Not Available | Positive | 1115861 - 1116748 | 32255.1 |
| abc transporter atp-binding protein | CTM90_04710 | Not Available | Positive | 1116748 - 1117746 | 37403.4 |
| abc transporter atp-binding protein | CTM90_04715 | Not Available | Positive | 1117743 - 1118567 | 30839.9 |
| orotidine-5'-phosphate decarboxylase | CTM90_04720 | Not Available | Negative | 1118673 - 1119392 | 25685.0 |
| lipopolysaccharide assembly protein lapb | CTM90_04725 | Not Available | Negative | 1119618 - 1120787 | 44744.1 |
| duf1049 domain-containing protein | CTM90_04730 | Not Available | Negative | 1120794 - 1121078 | 10447.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

